GO242096

Overview
NameGO242096
Unique NameGO242096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_ARATH (Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=2 SV=2)

HSP 1 Score: 359.377 bits (921), Expect = 1.321e-104
Identity = 169/217 (77.88%), Postives = 195/217 (89.86%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQLMGL 653
            WYQST+LG  QT ELIETF+NYQENI+RCVCIIYDPS+++ G LA KALKLSDSFM+LYR  NFTGEKLREKN SW+DIFEEIP+KVSNSAL+SAFMTELE DTPV+Q DYDRL  S++PFLE NMEFLI+CMDDLS+EQQKFQ+YYR+L+RQ AQQQ+WLQKRR EN ARK+AGEEPLPEEDPSNPIFK IPEP RLESFLI N+++N+C Q+ G+
Sbjct:  104 WYQSTVLGSYQTVELIETFMNYQENIKRCVCIIYDPSKADLGVLALKALKLSDSFMELYRGGNFTGEKLREKNFSWMDIFEEIPIKVSNSALVSAFMTELETDTPVSQGDYDRLHSSTTPFLENNMEFLIKCMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQKRRTENMARKSAGEEPLPEEDPSNPIFKAIPEPSRLESFLITNQVSNFCGQINGV 320          

HSP 2 Score: 43.1282 bits (100), Expect = 1.321e-104
Identity = 19/21 (90.48%), Postives = 20/21 (95.24%), Query Frame = 2
Query:  641 INGVTGQSFSRLYLTKALHDN 703
            INGV GQ+FSRLYLTKALHDN
Sbjct:  317 INGVAGQNFSRLYLTKALHDN 337          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_NEMVE (Eukaryotic translation initiation factor 3 subunit H OS=Nematostella vectensis GN=v1g168210 PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.420e-43
Identity = 85/214 (39.72%), Postives = 140/214 (65.42%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST LG      L+++  +YQ++I   V +IYDP R++QG L  KA +LSD  M LY+   F+ +KL +  +S+  +F+EIP+ + NS+L++  + EL+ +TP    D   L LS+  +LE+N+  L+E +D+L  +  K+  Y RS+ RQ  Q++++LQ+R+ EN++R   GE+PLP+ED S  +FKP+P P RL++ L++ ++  YC  +
Sbjct:   99 WYQSTYLGSYINRTLLDSQYSYQKSIEESVVLIYDPLRTSQGMLTLKAFRLSDEMMKLYKDGEFSADKLSKAGISFHSMFQEIPLVIKNSSLMNVLLCELDENTPTPSAD-QFLTLSTGSYLEKNVRVLMESVDELCQDSNKYHNYQRSVIRQQQQKENYLQRRQQENQSRIQRGEDPLPDEDLSK-MFKPLPVPSRLDNLLLSEQVNTYCQHV 310          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_TAEGU (Eukaryotic translation initiation factor 3 subunit H OS=Taeniopygia guttata GN=EIF3H PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 1.244e-39
Identity = 81/214 (37.85%), Postives = 138/214 (64.49%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ ++FEE+P+ + NS LI+  + ELE  + V  R ++ L L+SS  L ++++ L++ +D++S +  K+  Y R++++Q  Q+  + Q+R+ EN  R++ GE PLPEED  N +FKP   PPR+ES LIA +I  YC  +
Sbjct:  115 WYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLINVMLWELEKKSAVADR-HELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNVSKQQQQKHQYQQRRQQENIQRQSRGEPPLPEED-INKLFKPPQPPPRMESLLIAGQINTYCQNI 326          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_SALSA (Eukaryotic translation initiation factor 3 subunit H OS=Salmo salar GN=eif3h PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.625e-39
Identity = 82/214 (38.32%), Postives = 135/214 (63.08%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   +  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++  + +  +FEE+P+ + NS LI+  M ELE    V  + ++ L LSSS  LE++++ L++ +DD+S +  K+  Y R+L++Q  Q+  + Q+R+ EN  R+  GE PLPEED S  +FKP   PPR+++ LIA +I NYC  +
Sbjct:  111 WYQSTYYGSFVSRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKAMIGFEHMFEEVPIVIKNSHLINVLMWELEEKCTVADK-HELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYSRNLSKQQQQKHQYTQRRQQENAQRQTRGETPLPEEDVSK-MFKPPQPPPRMDTLLIAGQINNYCQNV 322          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EI3HB_DANRE (Eukaryotic translation initiation factor 3 subunit H-B OS=Danio rerio GN=eif3hb PE=2 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 3.620e-39
Identity = 79/214 (36.92%), Postives = 138/214 (64.49%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST+ G   +  L+++  +YQ  I   V +IYDP ++ QG+L  KA +L+   M++ +  +F+ E L++ ++ +  +FEE+P+ + NS LI+  + ELE  +    + ++ L LSSS  LE++++ L++ +DD+S +  K+  Y RSL++Q  Q+  ++Q+R+ EN  R++ GE PLPEED +  +FKP   PPR+++ LIA++I  YC  +
Sbjct:  100 WYQSTLYGSFVSRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLCLKAYRLTPKLMEICKEKDFSSEGLKKASVGYEHMFEEVPIVIKNSHLINVLLWELEEKSTAADK-HELLSLSSSSHLEKSLQMLMDRVDDMSQDIVKYNNYSRSLSKQQQQKHQYVQRRQQENAQRQSRGEPPLPEEDLTK-MFKPPQPPPRMDTLLIASQINTYCQTI 311          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_XENLA (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.728e-39
Identity = 80/222 (36.04%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQLMGLPDRAL 668
            WYQST  G   +  L+++  +YQ  I   V +IYDP +++QG+L+ KA +L+   M++ +  +F+ E L++ N+++ D+FEE+P+ + NS LI+  + EL+   PVT++ ++ L LSSS  LE++++ L++ +D++S +  K+  Y R++ +Q  Q+  + Q+++ EN  R + GE PLPEED  N +FKP   P R++  LIA +I  Y   + G   + L
Sbjct:  101 WYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTSQGSLSLKAYRLTPKLMEICKEKDFSAEGLKKANVAYEDMFEEVPIVIKNSHLINVLVWELDKKAPVTEK-HELLNLSSSNHLEKSLQLLMDRVDEMSQDIVKYNTYQRNVGKQQQQKHQYTQRKQQENLQRLSRGETPLPEED-VNKMFKPPVTPSRMDPLLIAGQINTYIQHIKGFTSQNL 320          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_XENTR (Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 8.065e-39
Identity = 80/214 (37.38%), Postives = 137/214 (64.02%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   +  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ D+FEE+P+ + NS LI+    EL+   PVT++ ++ L LSSS  LE++++ L++ +D+LS +  K+  Y R++++Q  Q+  + Q+R+ EN  R++ GE  LPEED  N +FKP   P R++S LIA +I  Y   +
Sbjct:  102 WYQSTFYGTFVSRALLDSQFSYQHAIEESVVLIYDPIKTGQGSLSLKAYRLTPKLMEVCKEKDFSAEGLKKANIAFEDMFEEVPIIIKNSHLINVLAWELDKKAPVTEK-HELLNLSSSNHLEKSLQLLMDRVDELSQDIVKYNTYLRNISKQQQQKHQYTQRRQQENLQRQSRGETSLPEED-VNKLFKPPVPPSRMDSLLIAGQINTYIQHI 313          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_CHICK (Eukaryotic translation initiation factor 3 subunit H OS=Gallus gallus GN=EIF3H PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 8.065e-39
Identity = 80/214 (37.38%), Postives = 137/214 (64.02%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++ ++FEE+P+ + NS LI+  + ELE  + V  R ++ L L+SS  L ++++ L++ +D++S +  K+  Y R++++Q  Q+  + Q+R+ EN  R++ GE PLPEED  N +FKP   P R+ES LIA +I  YC  +
Sbjct:  115 WYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANIAYENMFEEVPIVIKNSYLINVMLWELEKKSAVADR-HELLSLASSNHLGKSLQLLMDRVDEMSQDIVKYNTYLRNVSKQQQQKHQYQQRRQQENLQRQSRGEAPLPEED-INKLFKPPQPPARMESLLIAGQINTYCQNI 326          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EI3HA_DANRE (Eukaryotic translation initiation factor 3 subunit H-A OS=Danio rerio GN=eif3ha PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.797e-38
Identity = 80/214 (37.38%), Postives = 137/214 (64.02%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   +  L+++  +YQ  I   V +IYDP ++ QG+L  KA +L+   M++ +  +FT E L++  +++  +FEE+P+ + NS LI+  M +L+  + +  + ++ L LSSS  LE++++ L++ +DD+S +  K+  Y R+L++Q  Q+Q + Q+R+ EN  R++ GE PLPEED S  +FK    PPR+++ LIA +I NYC  +
Sbjct:  102 WYQSTYYGSFVSRALLDSQFSYQHAIEESVVLIYDPLKTAQGSLCLKAYRLTPKLMEICKEKDFTPEGLKKAAVAYEHMFEEVPIFIKNSHLINVLMWDLQEKSTLADK-HELLNLSSSNHLEKSLQLLMDRVDDMSQDIVKYNTYCRNLSKQQQQKQQYQQRRQQENAQRQSRGEPPLPEEDISK-MFKAPQAPPRMDTLLIAGQINNYCQNI 313          
BLAST of GO242096 vs. ExPASy Swiss-Prot
Match: EIF3H_RAT (Eukaryotic translation initiation factor 3 subunit H OS=Rattus norvegicus GN=Eif3h PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 4.003e-38
Identity = 80/214 (37.38%), Postives = 135/214 (63.08%), Query Frame = 3
Query:    3 WYQSTMLGCLQTAELIETFLNYQENIRRCVCIIYDPSRSNQGALAFKALKLSDSFMDLYRSNNFTGEKLREKNLSWVDIFEEIPVKVSNSALISAFMTELEPDTPVTQRDYDRLQLSSSPFLERNMEFLIECMDDLSVEQQKFQFYYRSLTRQLAQQQSWLQKRRDENKARKAAGEEPLPEEDPSNPIFKPIPEPPRLESFLIANRIANYCNQL 644
            WYQST  G   T  L+++  +YQ  I   V +IYDP ++ QG+L+ KA +L+   M++ +  +F+ E L++ N+++  +FEE+P+ + NS LI+  M ELE  + V  + ++ L L+SS  L +N++ L++ +D++S +  K+  Y R+ ++Q  Q+  + Q+R+ EN  R++ GE PLPEED S  +FKP   P R++S LIA +I  YC  +
Sbjct:  119 WYQSTYYGSFVTRALLDSQFSYQHAIEESVVLIYDPIKTAQGSLSLKAYRLTPKLMEVCKEKDFSPEALKKANITFEHMFEEVPIVIKNSHLINVLMWELEKKSAVADK-HELLSLASSNHLGKNLQLLMDRVDEMSQDIIKYNTYMRNSSKQQQQKHQYQQRRQQENMQRQSRGEPPLPEEDLSK-LFKPHQAPARMDSLLIAGQINTYCQNI 330          
The following BLAST results are available for this feature:
BLAST of GO242096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
EIF3H_ARATH1.321e-10477.88Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_NEMVE1.420e-4339.72Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_TAEGU1.244e-3937.85Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_SALSA1.625e-3938.32Eukaryotic translation initiation factor 3 subunit... [more]
EI3HB_DANRE3.620e-3936.92Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_XENLA4.728e-3936.04Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_XENTR8.065e-3937.38Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_CHICK8.065e-3937.38Eukaryotic translation initiation factor 3 subunit... [more]
EI3HA_DANRE1.797e-3837.38Eukaryotic translation initiation factor 3 subunit... [more]
EIF3H_RAT4.003e-3837.38Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank description744 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 889 5, mRNA sequence.