GO242095

Overview
NameGO242095
Unique NameGO242095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO242095 vs. ExPASy Swiss-Prot
Match: U497B_ARATH (UPF0497 membrane protein At2g37200 OS=Arabidopsis thaliana GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.789e-18
Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 3
Query:    3 GITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLASH 149
            GITVLI NDL +C +NHCTRFETATAMAFISWFA SPSF+LNFWSLA+H
Sbjct:  133 GITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH 180          
BLAST of GO242095 vs. ExPASy Swiss-Prot
Match: U4977_ARATH (UPF0497 membrane protein At2g28370 OS=Arabidopsis thaliana GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.197e-15
Identity = 37/48 (77.08%), Postives = 40/48 (83.33%), Query Frame = 3
Query:    3 GITVLISNDLNRCGINHCTRFETATAMAFISWFATSPSFLLNFWSLAS 146
            GITVLI NDLN C  NHC +FET+TA+AFISWFA  PSFL NFWSLAS
Sbjct:  131 GITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLAS 178          
The following BLAST results are available for this feature:
BLAST of GO242095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
U497B_ARATH9.789e-1883.67UPF0497 membrane protein At2g37200 OS=Arabidopsis ... [more]
U4977_ARATH1.197e-1577.08UPF0497 membrane protein At2g28370 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank description743 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 888 5, mRNA sequence.