GO242043
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.833e-43 Identity = 81/99 (81.82%), Postives = 94/99 (94.95%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 DE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F ES++EDLIKDA+MAIRETLQGETLKSS+CTV+V+G EPFH LDQE++QK+ID+F+ Sbjct: 138 DESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFE 236
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 176.022 bits (445), Expect = 1.833e-43 Identity = 80/99 (80.81%), Postives = 93/99 (93.94%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 DE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F +S+REDLIKDA++A+RETLQGETLKSS+CTVA++G EPFH LDQE +QK+ID+F+ Sbjct: 138 DESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFE 236
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.525e-34 Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV-----GAGEPFHILDQETVQKLIDSFDIA 303 DE GAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRFE +++ T E LIKDAL AI+ETLQGE L SS CTVA+V G EPF ++D + +Q++IDS + A Sbjct: 138 DESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSMEAA 243
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.393e-21 Identity = 46/98 (46.94%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG--ETLKSSICTVAVVGAGEPFHILDQETVQKLID 288 D+ GAH+Y CPSGN+++Y++ +IGSRSQ+AKTYLE+ FE+F E T E LI L A+RET+ +TL S ++ +VG G+PF I+++ Q ++ Sbjct: 138 DQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLN 235
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.574e-17 Identity = 44/99 (44.44%), Postives = 63/99 (63.64%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSF 294 D G HLY+ PSG+ F+++A A+G RSQAA+TYLE+ FE+F + ++LI AL A+ T G L T+A+VG G PF +L +E +K +D F Sbjct: 139 DSTGPHLYHTVPSGDVFDFKATAMGLRSQAARTYLEKHFESFPDCGLDELIMHALKALAAATSGGAELNIKNTTIAIVGKGTPFMVLTEEAARKYLDGF 237
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.480e-16 Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F E ++L+K L A+RETL E L + ++ +VG F I D + V +D + Sbjct: 138 DDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLE 237
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.758e-15 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F + ++L+K L A+RETL E L + ++ +VG F I D + V +D + Sbjct: 138 DDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLE 237
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F E +L+K L A+RETL E L + ++ +VG F I D + V ++ + Sbjct: 138 DDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLE 237
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F E +L+K L A+RETL E L + ++ +VG F I D + V ++ + Sbjct: 138 DDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLE 237
BLAST of GO242043 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.705e-15 Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 297 D+ G H++ CPS NYF+ +A +IG+RSQ+A+TYLER F E +L+K L A+RETL E L + ++ +VG F I D + V ++ + Sbjct: 138 DDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGLE 237 The following BLAST results are available for this feature:
BLAST of GO242043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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