GO242031

Overview
NameGO242031
Unique NameGO242031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13789 contig Csv1_Contig13789:1..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC1_MOUSE (LanC-like protein 1 OS=Mus musculus GN=Lancl1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.911e-18
Identity = 55/128 (42.97%), Postives = 75/128 (58.59%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGADHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            GA GV   L +A +VF  +R   DA  +  +V+W+ GL+KK  GL  GAAGNAYAFL+LY LT +  Y+ RA  F+ +     ++         AD  +SLF+G+AGT     DLL P  A+FP +EL
Sbjct:  278 GAPGVIYMLIQAYKVFKEERYLCDAQ-QCADVIWQYGLLKKGYGLCHGAAGNAYAFLALYNLTQDLKYLYRACKFAEWCLDYGEH-----GCRTADTPFSLFEGMAGTIYFLADLLVPTKAKFPAFEL 399          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC3_MOUSE (LanC-like protein 3 OS=Mus musculus GN=Lancl3 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGADHGYSLFQGLAGTACIWFDLLEPVNARFP 369
            GA G+A    KA  +     ++ D  I  GE+ W+ GL+KK  G+  G AG+AY FL LYRLTG + Y+ RA  F+ FL+        SG +   +  YSL++G +GT C   DLL+P  A FP
Sbjct:  296 GAPGIAYLFAKA-YLISKKPQYLDTCIRCGELTWQKGLLKKGPGICHGVAGSAYVFLLLYRLTGNSKYIYRAQRFAQFLFTEE---FKSG-SRVLESIYSLYEGFSGTVCFLIDLLQPNQAEFP 414          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC2_MOUSE (LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGA---DHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            GA GV   L +A QVF  ++  ++A +E  +V+W+ GL++K  G+  G +GN Y+FLSLYRLT +  Y+ RA  F+ +             AHG    D  YSLF+G+AG      D+L P  ARFP +EL
Sbjct:  323 GAPGVIHVLLQAYQVFKEEKYLKEA-MECSDVIWQRGLLRKGYGICHGTSGNGYSFLSLYRLTQDKKYLYRACKFAEWCLDYG--------AHGCRIPDRPYSLFEGMAGAVHFLSDILVPETARFPAFEL 444          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC1_DANRE (LanC-like protein 1 OS=Danio rerio GN=lancl1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 3.006e-17
Identity = 52/131 (39.69%), Postives = 80/131 (61.07%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGA---DHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            G+ GV   L +A +VF   R++ + A++ GEV+W+ GL+KK  GL  GAAGNAY FL+LY++T +  ++ RA  F+ +  +  +        HG    D  +SLF+G+AGT     DLL+P  A+FP +E+
Sbjct:  284 GSPGVIYMLIQAFKVF-GVRQYLEDALQCGEVIWQRGLLKKGYGLCHGAAGNAYGFLALYKITQDPKHLYRACMFADWCMNYGR--------HGCRTPDTPFSLFEGMAGTIYFLADLLQPARAKFPCFEV 405          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC3_HUMAN (LanC-like protein 3 OS=Homo sapiens GN=LANCL3 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.926e-17
Identity = 50/124 (40.32%), Postives = 68/124 (54.84%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGADHGYSLFQGLAGTACIWFDLLEPVNARFP 369
            GA G+A    KA  V     ++ D  I  GE+ W+ GL+KK  G+  G AG+AY FL LYRLTG + Y+ RA  F+ FL+           +   +  YSL++G +GT C   DLL+P  A FP
Sbjct:  296 GAPGIAYLFAKAYLVSKKP-QYLDTCIRCGELTWQKGLLKKGPGICHGVAGSAYVFLLLYRLTGNSKYIYRAQRFAQFLFTEE----FKAGSRVLESIYSLYEGFSGTVCFLIDLLQPNQAEFP 414          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC1_HUMAN (LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17
Identity = 55/131 (41.98%), Postives = 75/131 (57.25%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGA---DHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            GA GV   L +A +VF  ++   DA  +  +V+W+ GL+KK  GL  G+AGNAYAFL+LY LT +  Y+ RA  F+ +     +        HG    D  +SLF+G+AGT     DLL P  ARFP +EL
Sbjct:  278 GAPGVIYMLIQAYKVFREEKYLCDA-YQCADVIWQYGLLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLEYGE--------HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKARFPAFEL 399          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC1_RAT (LanC-like protein 1 OS=Rattus norvegicus GN=Lancl1 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 6.697e-17
Identity = 55/131 (41.98%), Postives = 74/131 (56.49%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGA---DHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            GA GV   L +A +VF  +    DA  +  +V+W+ GL+KK  GL  GAAGNAYAFL+LY LT +  Y+ RA  F+ +     +        HG    D  +SLF+G+AGT     DLL P  A+FP +EL
Sbjct:  278 GAPGVIYMLIQAYKVFKEEHYLCDAQ-QCADVIWQYGLLKKGYGLCHGAAGNAYAFLALYNLTQDAKYLYRACKFAEWCLDYGE--------HGCRTPDTPFSLFEGMAGTIYFLADLLVPTKAKFPAFEL 399          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC2_HUMAN (LanC-like protein 2 OS=Homo sapiens GN=LANCL2 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.948e-16
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGA---DHGYSLFQGLAGTACIWFDLLEPVNARFPGYEL 381
            GA GV   L +A +VF  ++  ++A +E  +V+W+ GL++K  G+  G AGN Y+FLSLYRLT +  Y+ RA  F+ +             AHG    D  YSLF+G+AG      D+L P  +RFP +EL
Sbjct:  323 GAPGVIHMLMQAYKVFKEEKYLKEA-MECSDVIWQRGLLRKGYGICHGTAGNGYSFLSLYRLTQDKKYLYRACKFAEWCLDYG--------AHGCRIPDRPYSLFEGMAGAIHFLSDVLGPETSRFPAFEL 444          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC3_DROME (LanC-like protein 3 homolog OS=Drosophila melanogaster GN=CG2061 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15
Identity = 48/124 (38.71%), Postives = 66/124 (53.23%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGADHGYSLFQGLAGTACIWFDLLEPVNARFP 369
            GA G    L KA  +F  ++ +  +     ++VWK G ++K  G+  G AGN Y FL L+RLT E  Y+ RA+ F   L +    L     A   D  +SL++G+AGT C   DLLEP  A FP
Sbjct:  295 GAPGAVYVLAKAYLIFKEEK-YLASLRRCADMVWKKGFLRKGPGICHGVAGNGYVFLLLFRLTNEMRYLYRAHKFMELLTNAEFKL----RARTPDRPHSLYEGVAGTVCYLVDLLEPEQAYFP 413          
BLAST of GO242031 vs. ExPASy Swiss-Prot
Match: LANC3_DROPS (LanC-like protein 3 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA15215 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 8.186e-15
Identity = 47/124 (37.90%), Postives = 67/124 (54.03%), Query Frame = 1
Query:    1 GATGVAITLCKASQVFPSDREFRDAAIEAGEVVWKNGLVKK-VGLADGAAGNAYAFLSLYRLTGETIYVERANAFSSFLYHNAQNLVTSGHAHGADHGYSLFQGLAGTACIWFDLLEPVNARFP 369
            GA G    L KA  +F  ++ +  +   + ++VWK G ++K  G+  G AGN Y FL L+RLT E  Y+ RA+ F   L     N      A   D+ +SL++G+AGT C   D+LEP  A FP
Sbjct:  296 GAPGAVYMLAKAYLIFKEEK-YLTSLRRSADLVWKKGFLRKGPGICHGVAGNGYVFLLLFRLTNEMKYLYRAHKFMELL----TNSEFKQRARIPDNPHSLYEGVAGTVCFLVDILEPEQAYFP 414          
The following BLAST results are available for this feature:
BLAST of GO242031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
LANC1_MOUSE7.911e-1842.97LanC-like protein 1 OS=Mus musculus GN=Lancl1 PE=1... [more]
LANC3_MOUSE3.006e-1741.13LanC-like protein 3 OS=Mus musculus GN=Lancl3 PE=2... [more]
LANC2_MOUSE3.006e-1740.46LanC-like protein 2 OS=Mus musculus GN=Lancl2 PE=1... [more]
LANC1_DANRE3.006e-1739.69LanC-like protein 1 OS=Danio rerio GN=lancl1 PE=2 ... [more]
LANC3_HUMAN3.926e-1740.32LanC-like protein 3 OS=Homo sapiens GN=LANCL3 PE=2... [more]
LANC1_HUMAN5.127e-1741.98LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1... [more]
LANC1_RAT6.697e-1741.98LanC-like protein 1 OS=Rattus norvegicus GN=Lancl1... [more]
LANC2_HUMAN1.948e-1639.69LanC-like protein 2 OS=Homo sapiens GN=LANCL2 PE=1... [more]
LANC3_DROME6.268e-1538.71LanC-like protein 3 homolog OS=Drosophila melanoga... [more]
LANC3_DROPS8.186e-1537.90LanC-like protein 3 homolog OS=Drosophila pseudoob... [more]
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Properties
Property NameValue
Genbank description679 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 822 5, mRNA sequence.