GO242021

Overview
NameGO242021
Unique NameGO242021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10886 contig Csv1_Contig10886:1103..1915. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX_SOYBN (Calnexin homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.514e-56
Identity = 106/153 (69.28%), Postives = 124/153 (81.05%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV-XXXXXXXXXXXXGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK-AKV 453
            GIWKP++IPNP YFEL KPDFEPIAA+GIEIWTMQDGILFDN+LI+ D+KVAESYR + WKPKF V             GSDG++GFQK VFDLLYK+ADIPFL  +K KI D+IEK EKQPNLTIGILV+VV V +++ F++IFGGKK AKV
Sbjct:  351 GIWKPREIPNPEYFELAKPDFEPIAAIGIEIWTMQDGILFDNVLIANDDKVAESYRETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIEKAEKQPNLTIGILVAVVVVFVSIFFRLIFGGKKPAKV 503          
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX2_ARATH (Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g07340 PE=2 SV=2)

HSP 1 Score: 215.698 bits (548), Expect = 2.475e-55
Identity = 104/152 (68.42%), Postives = 123/152 (80.92%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-SDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKAKV 453
            GIWKP+ IPNP+YFEL++P+ EPIAA+GIEIWTMQDGILFDNILISKDEKVAE+YR S WKPKFDV            G +DGL  +QK VFDLLYKVADI FL AYK KI+++IEK E QPNLTIG+L+S+V V +++ FK+IFGG KAKV
Sbjct:  344 GIWKPRDIPNPDYFELERPNLEPIAAIGIEIWTMQDGILFDNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIEKAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKV 495          
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX_PEA (Calnexin homolog OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.737e-54
Identity = 100/155 (64.52%), Postives = 121/155 (78.06%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXG-------SDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKK 444
            GIWKPQ+IPNP YFEL+KPDFEPIAA+GIEIWTMQDGILFDN+LI+KD+K+AESYR + WKPKF++                    S+G+AG QK  FDLLYK+ADI FL   K KII++IEKGEKQPNLTIGI+VSVV V +++ F++IFGGKK
Sbjct:  350 GIWKPQEIPNPEYFELEKPDFEPIAAIGIEIWTMQDGILFDNVLIAKDDKIAESYRETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAFDLLYKIADIAFLSGQKEKIIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGGKK 504          
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX1_ARATH (Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.963e-54
Identity = 101/150 (67.33%), Postives = 120/150 (80.00%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDVXXXXXXXXXXXXGS-DGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 447
            GIWKP+ IPNP+YFELD+PD+EPIAA+GIEIWTMQDGILFDNILI+KDEKVAE+YR + WKPKFDV            GS DGL  +QK VFDLL KVAD+ FL AYK KI ++IEK E+QPNLTIG+LV++V V  ++  K+IFGGKKA
Sbjct:  342 GIWKPRDIPNPDYFELDRPDYEPIAAIGIEIWTMQDGILFDNILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIEKAEQQPNLTIGVLVAIVVVFFSLFLKLIFGGKKA 491          
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX_HELTU (Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.657e-41
Identity = 83/155 (53.55%), Postives = 110/155 (70.97%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKPDFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESY------RASAWKPKFDVXXXXXXXXXXXXGSDGLAGFQKTVFDLLYKVADIPFLDAYKLKIIDVIEKGEKQPNLTIGILVSVVAVIITVLFKIIFGGKKA 447
            GIWKP++IPNP+YFEL+KP+FEPIAA+GIE    QDGILFDNILI+ DEK A         R+  WK +                 DGL G QK VFD+LYK+AD+PFL  +K+K++++IEK E QPN+TIG++VS++ VI ++L K++FGGKKA
Sbjct:  346 GIWKPREIPNPDYFELEKPNFEPIAAIGIEDLDQQDGILFDNILIASDEKTAAKSGILLGSRSLRWKKR------NRRLKKNQPLLDGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILLKLLFGGKKA 494          
BLAST of GO242021 vs. ExPASy Swiss-Prot
Match: CALX_ASPFU (Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_4G12850 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12
Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 GIWKPQQIPNPNYFELDKP-DFEPIAAVGIEIWTMQDGILFDNILISKDEKVAESYRASAWKPKFDV 198
            GIWKP++IPNP YFE   P +FEP+ AVG EIWTMQ+ ILFDNI I    + AE  R   +  K  V
Sbjct:  372 GIWKPRKIPNPAYFEDKTPSNFEPMGAVGFEIWTMQNDILFDNIYIGHSIEDAEKLRKETFDLKHPV 438          
The following BLAST results are available for this feature:
BLAST of GO242021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
CALX_SOYBN6.514e-5669.28Calnexin homolog OS=Glycine max PE=2 SV=1[more]
CALX2_ARATH2.475e-5568.42Calnexin homolog 2 OS=Arabidopsis thaliana GN=At5g... [more]
CALX_PEA2.737e-5464.52Calnexin homolog OS=Pisum sativum PE=2 SV=1[more]
CALX1_ARATH7.963e-5467.33Calnexin homolog 1 OS=Arabidopsis thaliana GN=CNX1... [more]
CALX_HELTU2.657e-4153.55Calnexin homolog OS=Helianthus tuberosus PE=2 SV=1[more]
CALX_ASPFU3.385e-1255.22Calnexin homolog OS=Aspergillus fumigatus GN=AFUA_... [more]
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Properties
Property NameValue
Genbank description669 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 812 5, mRNA sequence.