GO242019

Overview
NameGO242019
Unique NameGO242019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO242019_ssr498 microsatellite GO242019_ssr498:498..507. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO242019 vs. ExPASy Swiss-Prot
Match: UFOG5_MANES (Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot esculenta GN=GT5 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.153e-18
Identity = 48/85 (56.47%), Postives = 64/85 (75.29%), Query Frame = 3 
Query:    3 EQKMNATMLTEELGVAIRSKEVPSEKSVVGRGEIEMMVWRIVAEKQGHAIRNRVKELKHSAQKALINGGSSYNSLSKIAHECENS 257
            EQ+MNAT+LTEELGVA+R K +P+ K VV R EIE M+ RI+ +++G  IR RV+ELK S +KAL  GGSS+N +S + +E E S
Sbjct:  393 EQRMNATLLTEELGVAVRPKNLPA-KEVVKREEIERMIRRIMVDEEGSEIRKRVRELKDSGEKALNEGGSSFNYMSALGNEWEKS 476
The following BLAST results are available for this feature:
BLAST of GO242019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UFOG5_MANES2.153e-1856.47Anthocyanidin 3-O-glucosyltransferase 5 OS=Manihot... [more]
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Properties
Property NameValue
Genbank description667 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 810 5, mRNA sequence.