GO241932

Overview
NameGO241932
Unique NameGO241932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13783 contig Csv1_Contig13783:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of GO241932 vs. ExPASy Swiss-Prot
Match: Y3272_ARATH (Kelch repeat-containing protein At3g27220 OS=Arabidopsis thaliana GN=At3g27220 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.903e-47
Identity = 82/113 (72.57%), Postives = 100/113 (88.50%), Query Frame = 2 
Query:    2 MLDDEMKWKVLPSMPKPDSHIEFAWVLVNNSIVIVGGTTEKHPTTKKMVLVGEIFQFNLNTLKWHVIGKLPYRVKTTLAGYWNGWLYFTSGQRDKGPGDPAPRKVHGDMWRTK 340
            M+D+EMKWK+LP MPK +SHIE AW++VNNSIVIVGGTT+ HP TK++VLVGEIF+F L+TL W VIG+LPYRVKT +AG+WNG+LYFTSGQRD+GP +P P KV G+MWRTK
Sbjct:  311 MMDEEMKWKMLPPMPKNNSHIESAWIIVNNSIVIVGGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWNGYLYFTSGQRDRGPDNPQPGKVIGEMWRTK 423
The following BLAST results are available for this feature:
BLAST of GO241932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3272_ARATH6.903e-4772.57Kelch repeat-containing protein At3g27220 OS=Arabi... [more]
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Properties
Property NameValue
Genbank description580 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 722 5, mRNA sequence.