GO241916

Overview
NameGO241916
Unique NameGO241916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: SMT2_ARATH (24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 4.905e-55
Identity = 96/125 (76.80%), Postives = 113/125 (90.40%), Query Frame = 1
Query:    4 EAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKPHPPKSS 378
            +AE+ EHV++IQGIERGDALPGLR+Y +I E AK+VGFE+VKEKDLA PPA+PWWTRLKMGR AYWRNHI+V IL+A+G+APKGTV VH+MLFKTADYLTRGGETGIF+PMHM+L RKP  P+ S
Sbjct:  236 KAEDDEHVEVIQGIERGDALPGLRAYVDIAETAKKVGFEIVKEKDLASPPAEPWWTRLKMGRLAYWRNHIVVQILSAVGVAPKGTVDVHEMLFKTADYLTRGGETGIFSPMHMILCRKPESPEES 360          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: SMT3B_ARATH (24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.976e-52
Identity = 92/117 (78.63%), Postives = 107/117 (91.45%), Query Frame = 1
Query:   10 ENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            +++EH D+IQGIERGDALPGLRSYA+I   AK+VGFEVVKEKDLAKPP++PWW RLKMGR AYWRNH++V IL+A+G+APKGTV VH MLFKTADYLTRGGETGIF+PMHM+L RKP
Sbjct:  238 DDEEHKDVIQGIERGDALPGLRSYADIAVTAKKVGFEVVKEKDLAKPPSKPWWNRLKMGRIAYWRNHVVVVILSAIGVAPKGTVDVHKMLFKTADYLTRGGETGIFSPMHMILCRKP 354          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: SMT2_ORYSJ (24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 4.602e-45
Identity = 86/118 (72.88%), Postives = 96/118 (81.36%), Query Frame = 1
Query:    7 AENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            A+N EHV+ I GIERGDALPGLR   EI  IAK VGFEV+KE DLA PPA PWWTRLKMGR AYWRN ++V +L  L IAPKG   VH+ML++TA +LTRGGETGIFTPMHMVLLRKP
Sbjct:  242 ADNPEHVEAIHGIERGDALPGLRRQDEIASIAKEVGFEVLKELDLALPPALPWWTRLKMGRIAYWRNSLVVRVLTMLRIAPKGVCEVHEMLYETAQHLTRGGETGIFTPMHMVLLRKP 359          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: SMT1_ORYSJ (Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.963e-15
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 1
Query:    4 EAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWR----------NHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            E  N  H  I   IE G+ LP +RS  +  + AK  GFEV+ +KDLA+    PW+  L   RF+                +V  L  +G+AP+G+  V + L K A+ L  GG+  IFTPM+  L+RKP
Sbjct:  213 EPNNATHKRIKDEIELGNGLPDIRSTQQCLQAAKDAGFEVIWDKDLAEDSPVPWYLPLDPSRFSLSSFRLTTVGRAITRTMVKALEYVGLAPQGSERVSNFLEKAAEGLVEGGKKEIFTPMYFFLVRKP 341          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: SMT1_ARATH (Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.886e-14
Identity = 48/129 (37.21%), Postives = 66/129 (51.16%), Query Frame = 1
Query:    4 EAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQPWWTRLKMGRFAYWRNHI----------LVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            + +N EH  I   IE GD LP +R   +  E  K+ GFEV+ EKDLAK    PW+  L    F+     +          +V IL  + +AP+G+  V + L + A+ L  GG   IFTPM+  L RKP
Sbjct:  207 DPDNAEHQKIKGEIEIGDGLPDIRLTTKCLEALKQAGFEVIWEKDLAKDSPVPWYLPLDKNHFSLSSFRLTAVGRFITKNMVKILEYIRLAPQGSQRVSNFLEQAAEGLVDGGRREIFTPMYFFLARKP 335          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: ERG6_PNECA (Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.494e-11
Identity = 40/137 (29.20%), Postives = 66/137 (48.18%), Query Frame = 1
Query:    4 EAENKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLA-KPPAQPWWTRL-----------------KMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            +  + EH  I+ GIE GD++P +    E      +VGFE++  ++L+ K    PW+  L                 +M     W     + ++  +G+ PKG+  V+D+L   AD L + G+  IFTPM + + RKP
Sbjct:  239 DENDPEHQQIVYGIEIGDSIPKISKIGEAEAALIKVGFEIIHSEELSTKNSPLPWYYYLDGDLRKVRSFRDFISIARMTTIGKWLISSFIGLMEFIGLLPKGSKKVNDILLVAADSLVKAGKKEIFTPMQLWVCRKP 375          
BLAST of GO241916 vs. ExPASy Swiss-Prot
Match: ERG6_KLULA (Sterol 24-C-methyltransferase OS=Kluyveromyces lactis GN=ERG6 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.329e-11
Identity = 44/134 (32.84%), Postives = 64/134 (47.76%), Query Frame = 1
Query:   13 NKEHVDIIQGIERGDALPGLRSYAEITEIAKRVGFEVVKEKDLAKPPAQ-PWWTRL-----------------KMGRFAYWRNHILVTILAALGIAPKGTVGVHDMLFKTADYLTRGGETGIFTPMHMVLLRKP 360
            N EH  I   IE GD +P + S     +   +VGFE+++E DLA    + PW+  L                 +  R        +VT+   LG+APKG+V V + L + A  L  GGE  +FTPM + + +KP
Sbjct:  235 NPEHRKIAYEIELGDGIPKMYSVDAARDALSKVGFEILEENDLADNDDEIPWYAPLTGEWKYVNSVADLATFFRTSRLGRAFTTSMVTVFEKLGLAPKGSVSVTNALEEAAVGLVAGGEKKLFTPMMLFVAKKP 368          
The following BLAST results are available for this feature:
BLAST of GO241916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
SMT2_ARATH4.905e-5576.8024-methylenesterol C-methyltransferase 2 OS=Arabid... [more]
SMT3B_ARATH2.976e-5278.6324-methylenesterol C-methyltransferase 3 OS=Arabid... [more]
SMT2_ORYSJ4.602e-4572.8824-methylenesterol C-methyltransferase 2 OS=Oryza ... [more]
SMT1_ORYSJ4.963e-1537.21Cycloartenol-C-24-methyltransferase 1 OS=Oryza sat... [more]
SMT1_ARATH1.886e-1437.21Cycloartenol-C-24-methyltransferase OS=Arabidopsis... [more]
ERG6_PNECA1.494e-1129.20Sterol 24-C-methyltransferase OS=Pneumocystis cari... [more]
ERG6_KLULA3.329e-1132.84Sterol 24-C-methyltransferase OS=Kluyveromyces lac... [more]
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Properties
Property NameValue
Genbank description564 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 706 5, mRNA sequence.