GO241911

Overview
NameGO241911
Unique NameGO241911
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10258 contig Csv1_Contig10258:944..1412. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241911 vs. ExPASy Swiss-Prot
Match: YCF39_PORPU (Uncharacterized protein ycf39 OS=Porphyra purpurea GN=ycf39 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.868e-23
Identity = 44/98 (44.90%), Postives = 72/98 (73.47%), Query Frame = 2
Query:    2 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 295
            CE+L+GQ   ++ +P+S+L+  R++T+  +WT +++DRLAF+EVLTS  +F  PM+E +++L +D  ++I+LEKY Q+YF  ILK LKD+  +  Q D
Sbjct:  217 CEKLSGQKTQISQIPLSLLKALRKITKTLQWTWNISDRLAFAEVLTSGEIFMAPMNEVYEILSIDKSEVISLEKYFQEYFGKILKVLKDISYEQSQQD 314          
BLAST of GO241911 vs. ExPASy Swiss-Prot
Match: YCF39_PORYE (Uncharacterized protein ycf39 OS=Porphyra yezoensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 5.814e-22
Identity = 43/98 (43.88%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQAD 295
            CE+L+GQ   ++ +P+ +L+  R++T+  +WT +++DRLAF+E+L+S   F+ PM E + +LG+D  ++I+LEKYLQ+YF  ILK LKD+  +  Q D
Sbjct:  217 CEKLSGQKTQISQIPIGLLKALRRITKTLQWTWNISDRLAFAEILSSGEQFTAPMDEVYSILGIDRLEVISLEKYLQEYFGKILKVLKDITYEQGQQD 314          
BLAST of GO241911 vs. ExPASy Swiss-Prot
Match: YCF39_GUITH (Uncharacterized protein ycf39 OS=Guillardia theta GN=ycf39 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 7.107e-20
Identity = 43/96 (44.79%), Postives = 67/96 (69.79%), Query Frame = 2
Query:    2 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 289
            CERL+GQ AN+T +P+ +L F + LT FFEWT ++++RLAF+EVL +    +  M+ T+   G +  DI +LE Y+QDYF  IL++LK+L  + ++
Sbjct:  217 CERLSGQKANITKIPLQLLVFFKYLTGFFEWTTNISERLAFAEVLNARQDITSEMASTYSQFGFEPNDITSLESYMQDYFGRILRRLKELSDERER 312          
BLAST of GO241911 vs. ExPASy Swiss-Prot
Match: YCF39_CYAPA (Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.068e-19
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 2
Query:    2 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 289
            CERL+GQ+A VT VP++ L   R  + FFEW  ++ADRLAF+EVL+    F+  M E + +  +++     LE YLQ+YF+ ILK+LK++ +Q  Q
Sbjct:  217 CERLSGQNAKVTRVPIAFLELARNTSCFFEWGWNIADRLAFTEVLSKSQFFNSSMDEVYKIFKIESTSTTILESYLQEYFSRILKRLKEINSQQSQ 312          
BLAST of GO241911 vs. ExPASy Swiss-Prot
Match: YCF39_ODOSI (Uncharacterized protein ycf39 OS=Odontella sinensis GN=ycf39 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 8.991e-15
Identity = 36/96 (37.50%), Postives = 58/96 (60.42%), Query Frame = 2
Query:    2 CERLAGQDANVTMVPVSVLRFTRQLTRFFEWTNDVADRLAFSEVLTSDTVFSVPMSETFDLLGVDAKDIITLEKYLQDYFTNILKKLKDLKAQSKQ 289
            CE+LAGQ A V  +P+ +L+   Q+  FFEW  +++DRLAF+E+L  +  FS    + +    VD  +I  L+ Y  +YF  +LK+L+D+  +  Q
Sbjct:  217 CEQLAGQSAKVNKIPLFLLKLVSQIFGFFEWGQNISDRLAFAEILNVENDFSKSTFDLYKTFKVDDSEITQLDDYFLEYFIRLLKRLRDINFEDIQ 312          
The following BLAST results are available for this feature:
BLAST of GO241911 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
YCF39_PORPU6.868e-2344.90Uncharacterized protein ycf39 OS=Porphyra purpurea... [more]
YCF39_PORYE5.814e-2243.88Uncharacterized protein ycf39 OS=Porphyra yezoensi... [more]
YCF39_GUITH7.107e-2044.79Uncharacterized protein ycf39 OS=Guillardia theta ... [more]
YCF39_CYAPA2.068e-1944.79Uncharacterized protein ycf39 OS=Cyanophora parado... [more]
YCF39_ODOSI8.991e-1537.50Uncharacterized protein ycf39 OS=Odontella sinensi... [more]
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Properties
Property NameValue
Genbank description559 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 701 5, mRNA sequence.