GO241902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SR54C_ARATH (Signal recognition particle 54 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=FFC PE=1 SV=1) HSP 1 Score: 457.603 bits (1176), Expect = 1.588e-134 Identity = 230/267 (86.14%), Postives = 254/267 (95.13%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNLEDALKSDRR 801 I+DTAGRLQIDK MMDELKDVK+ LNPTEVLLVVDAMTGQEAA LVTTFN+EIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKA EVM+QEDAE++QKKIMSA FDFNDFLKQTR VA+MGSM+RV+GMIPGMGK++PAQ+REAEK+L +MEAMIE MTPEERE+PELLAESP RRKR+A+DSGKTEQ VS LVAQ+FQMRV+MKNLMGVME GS+PALS LEDALK++++ Sbjct: 263 IMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDAEDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGKVSPAQIREAEKNLLVMEAMIEVMTPEERERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGVMEGGSIPALSGLEDALKAEQK 529 HSP 2 Score: 44.669 bits (104), Expect = 1.588e-134 Identity = 18/27 (66.67%), Postives = 27/27 (100.00%), Query Frame = 3 Query: 795 QKAPPGTARRKKRSESRRQFVDSASTR 875 QKAPPGTARRK++++SR++FV+SAS++ Sbjct: 528 QKAPPGTARRKRKADSRKKFVESASSK 554
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SYNY3 (Signal recognition particle protein OS=Synechocystis sp. (strain PCC 6803) GN=ffh PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 1.141e-77 Identity = 146/251 (58.17%), Postives = 191/251 (76.10%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL-MGVMESG 750 ++DTAGRLQID MM EL ++K+V+ P + LLVVDAMTGQEAA L TF+ +IGITGAILTKLDGD+RGGAALSV+++SG+PIK VG GE++E L+PFYPDR+A RIL MGDVL+ VEKAQE + D E++Q KI+ A FDF+DF+KQ R + MGS+ ++ MIPGM K++ + + EK LK EAMI +MT EER+ P+LLA+SP RR+R+AQ SG +E VS+L+ +MR M+ + MG M G Sbjct: 187 LIDTAGRLQIDPQMMAELAEIKQVVKPDDTLLVVDAMTGQEAANLTHTFHEQIGITGAILTKLDGDTRGGAALSVRQISGQPIKFVGVGEKVEALQPFYPDRLASRILNMGDVLTLVEKAQEAIDVGDVEKLQNKILEATFDFDDFIKQMRFMKNMGSLGGLLKMIPGMNKLSSGDIEKGEKELKRTEAMISSMTTEERKNPDLLAKSPSRRRRIAQGSGHSETDVSKLITNFTKMRTMMQQMGMGGMPGG 437
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_SYNE7 (Signal sequence-binding protein OS=Synechococcus elongatus (strain PCC 7942) GN=ffh PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 5.664e-77 Identity = 149/259 (57.53%), Postives = 191/259 (73.75%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGM-GKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNL 774 IVDTAGRLQID MM+EL VK + P EVLLVVD+M GQEAA+L +F+ IGITGAILTKLDGDSRGGAALS++ VSG+PIK VG GE++E L+PF+P+RMA RILGMGDVL+ VEKAQE + D E+MQ+KI++A FDF DFLKQ R + MGS++ I +IPG+ GKI Q+R+ E+ LK +EAMI +MTP+ER P+LL+ SP RR R+A+ G+TE + Q++ Q QMR M+ M G P + + Sbjct: 187 IVDTAGRLQIDTEMMEELAQVKEAIAPHEVLLVVDSMIGQEAASLTRSFHERIGITGAILTKLDGDSRGGAALSIRRVSGQPIKFVGLGEKVEALQPFHPERMASRILGMGDVLTLVEKAQEEIDLADVEKMQEKILAAKFDFTDFLKQMRLLKNMGSLAGFIKLIPGLGGKINDEQLRQGERQLKRVEAMINSMTPQERRDPDLLSNSPSRRHRIAKGCGQTEAEIRQIIQQFQQMRTMMQQ----MSQGGFPGMGGM 441
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_STRMU (Signal recognition particle protein OS=Streptococcus mutans GN=ffh PE=3 SV=3) HSP 1 Score: 239.58 bits (610), Expect = 2.310e-62 Identity = 118/245 (48.16%), Postives = 173/245 (70.61%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITP-AQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLM 732 ++DTAGRLQID+ +M EL+D+K + NP E+LLVVD+M GQEAA + FN ++ +TG ILTK+DGD+RGGAALSV++++GKPIK G GE++ D+E F+PDRM+ RILGMGD+L+ +EKA + ++ + E+ +K+ +FDFNDF++Q V MGSM ++ MIPGM A V+ E + A++ +MTPEERE P+LL +P RR+R+A SG T +V++ + Q + M+ +M Sbjct: 189 LIDTAGRLQIDEKLMTELRDIKALANPNEILLVVDSMIGQEAANVAREFNQQLEVTGVILTKIDGDTRGGAALSVRQITGKPIKFTGTGEKITDIETFHPDRMSSRILGMGDLLTLIEKASQDYDEQKSAELAEKMRENSFDFNDFIEQLDQVQNMGSMEDILKMIPGMANNPALANVKVDEGEIARKRAIVSSMTPEERENPDLL--TPSRRRRIASGSGNTFVNVNKFIKDFNQAKKMMQGVM 431
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_BACSU (Signal recognition particle protein OS=Bacillus subtilis GN=ffh PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 116/244 (47.54%), Postives = 178/244 (72.95%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQ-VREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 I+DTAGRL ID +MDEL +VK + NP E+ LVVD+MTGQ+A + +FN ++G+TG +LTKLDGD+RGGAALS++ V+ PIK G GE+++ LEPF+P+RMA RILGMGDVL+ +EKAQ + ++ A+E+++K+ + +F +DFL+Q V MG + ++ M+PG GK+ + ++ EK L +EA+I++MT E+E+P+++ S RRKR+A+ SG + Q V++L+ Q +M+ MK + Sbjct: 189 ILDTAGRLHIDHELMDELTNVKEIANPEEIFLVVDSMTGQDAVNVAKSFNEQLGLTGVVLTKLDGDTRGGAALSIRAVTNTPIKFAGLGEKLDALEPFHPERMASRILGMGDVLTLIEKAQASVDEDKAKELEQKMRTMSFTLDDFLEQLGQVRNMGPLDELLQMMPGAGKMKGLKNIQVDEKQLNHVEAIIKSMTVLEKEQPDIINAS--RRKRIAKGSGTSVQEVNRLLKQFDEMKKMMKQM 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_AQUAE (Signal recognition particle protein OS=Aquifex aeolicus GN=ffh PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 4.357e-61 Identity = 117/258 (45.35%), Postives = 178/258 (68.99%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNLMGVMESGSLPALSNL 774 ++DTAGRL +D+ +M EL+++K V NP+E+L V DAM GQ A TF+ +G+TG ++TK+DGD+RGG ALSVKEV G PIK +G GE++ED+EPFYPDR+A RILG+GD+ S VEKAQEV+ ++ A+ M K+M+ FD D + R + +MG + +++ MIPG+ ++ EK K +EA+I +MTPEER P+++ S R+KR+A+ SG T V++L+ + +M+ M+ L ++G +PA+ + Sbjct: 182 LLDTAGRLHVDEELMKELQEIKEVTNPSEILYVADAMQGQTALETAKTFHERLGLTGVVITKMDGDARGGLALSVKEVLGVPIKFIGVGEKIEDIEPFYPDRIAQRILGLGDIQSLVEKAQEVITEDKAQVMATKVMTGEFDLEDLREMLRMIQQMGPLDKLLSMIPGVAP-QLKHLKVDEKQFKKIEAIINSMTPEERRNPKIINMS--RKKRIARGSGTTVSDVNKLLKRYEEMKKMMRKL---QKAGGMPAIPKM 433
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ECOLI (Signal recognition particle protein OS=Escherichia coli (strain K12) GN=ffh PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.401e-59 Identity = 121/246 (49.19%), Postives = 170/246 (69.11%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 +VDTAGRL +D+AMMDE+K V +NP E L VVDAMTGQ+AA FN + +TG +LTK+DGD+RGGAALS++ ++GKPIK +G GE+ E LEPF+PDR+A RILGMGDVLS +E + + + AE++ K+ + FD NDFL+Q R + MG M+ ++G +PGMG+I P V+ +K L MEA+I +MT +ER KPE++ S R++R+A G Q V++L+ Q M+ MK + Sbjct: 188 LVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI-PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGS--RKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKM 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ECOL6 (Signal recognition particle protein OS=Escherichia coli O6 GN=ffh PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.401e-59 Identity = 121/246 (49.19%), Postives = 170/246 (69.11%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 +VDTAGRL +D+AMMDE+K V +NP E L VVDAMTGQ+AA FN + +TG +LTK+DGD+RGGAALS++ ++GKPIK +G GE+ E LEPF+PDR+A RILGMGDVLS +E + + + AE++ K+ + FD NDFL+Q R + MG M+ ++G +PGMG+I P V+ +K L MEA+I +MT +ER KPE++ S R++R+A G Q V++L+ Q M+ MK + Sbjct: 188 LVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI-PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGS--RKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKM 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_ECO57 (Signal recognition particle protein OS=Escherichia coli O157:H7 GN=ffh PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 1.401e-59 Identity = 121/246 (49.19%), Postives = 170/246 (69.11%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSAN-FDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREA--EKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 +VDTAGRL +D+AMMDE+K V +NP E L VVDAMTGQ+AA FN + +TG +LTK+DGD+RGGAALS++ ++GKPIK +G GE+ E LEPF+PDR+A RILGMGDVLS +E + + + AE++ K+ + FD NDFL+Q R + MG M+ ++G +PGMG+I P V+ +K L MEA+I +MT +ER KPE++ S R++R+A G Q V++L+ Q M+ MK + Sbjct: 188 LVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDFLEQLRQMKNMGGMASLMGKLPGMGQI-PDNVKSQMDDKVLVRMEAIINSMTMKERAKPEIIKGS--RKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKM 430
BLAST of GO241902 vs. ExPASy Swiss-Prot
Match: SRP54_THEAQ (Signal recognition particle protein OS=Thermus aquaticus GN=ffh PE=1 SV=3) HSP 1 Score: 223.787 bits (569), Expect = 1.312e-57 Identity = 117/243 (48.15%), Postives = 168/243 (69.14%), Query Frame = 1 Query: 1 IVDTAGRLQIDKAMMDELKDVKRVLNPTEVLLVVDAMTGQEAATLVTTFNIEIGITGAILTKLDGDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKAQEVMQQEDAEEMQKKIMSANFDFNDFLKQTRTVARMGSMSRVIGMIPGMGKITPAQVREAEKSLKIMEAMIEAMTPEEREKPELLAESPVRRKRVAQDSGKTEQHVSQLVAQLFQMRVRMKNL 729 +VDTAGRLQID+ +M EL +K VL P EVLLV+DAMTGQEA ++ F+ ++G+TG +LTKLDGD+RGGAALS + V+GKPI G E+ E LEPFYP+R+AGRILGMGDV S EK + + +A + K++ DFLKQ + + R+G S ++G++PG+ P ++ EK++K +EA++ +MTPEER+ P +L S RRKR+A+ SG + Q V++ + +M+ MK+L Sbjct: 185 LVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARAFDEKVGVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRAAGLEAEAPKSAKEL-----SLEDFLKQMQNLKRLGPFSEILGLLPGV----PQGLKVDEKAIKRLEAIVLSMTPEERKDPRILNGS--RRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSL 416 The following BLAST results are available for this feature:
BLAST of GO241902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 129
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