GO241897

Overview
NameGO241897
Unique NameGO241897
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1387 contig Csv1_Contig1387:777..1253. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 7.508e-36
Identity = 71/85 (83.53%), Postives = 75/85 (88.24%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVKIG+PAK+KV  EH DK F DQCT CEKEAVNVSL NLLTYPFVREGLV KTLALKGG+YDFVNG FELWGL+FGLSP LSV
Sbjct:  237 DWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKGGHYDFVNGGFELWGLEFGLSPSLSV 321          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 3.726e-35
Identity = 67/85 (78.82%), Postives = 74/85 (87.06%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            +WVKIG+PAK+KV  +HGD PF + CT+CEKEAVN SL NLLTYPFVREGLVNKTLALKGGYYDFV GSFELWGL+FGLS   SV
Sbjct:  244 EWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV 328          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 1.084e-34
Identity = 67/85 (78.82%), Postives = 75/85 (88.24%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVKI +PAK KVL EHG+  F +QCT+CEKEAVNVSL NLLTYPFVR+GLV KTLAL+GGYYDFVNGSFELWGL++GLSP  SV
Sbjct:  235 DWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQGGYYDFVNGSFELWGLEYGLSPSQSV 319          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 3.856e-32
Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL NKTLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  246 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 1.122e-31
Identity = 65/85 (76.47%), Postives = 72/85 (84.71%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVKI +PAKSKV++E GD  F DQC  CE+EAVNVSL+NLLTYPFVREGLV  TLALKGGYYDFV G+FELWGL+FGLS   SV
Sbjct:  252 DWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKGGYYDFVKGAFELWGLEFGLSETSSV 336          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.465e-31
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  245 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 329          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.465e-31
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  246 DWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.465e-31
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVK+ +PAKSKV+ EH      DQC  CEKEAVNVSL NLLTYPFVR+GL N TLALKGG+YDFVNG+FELW LDFGLS P SV
Sbjct:  246 DWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKGGHYDFVNGTFELWALDFGLSSPTSV 330          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 2.763e-30
Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = 1
Query:    1 DWVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPLSV 255
            DWVKI +PAKSKVL E     F DQC  CE+EAVNVSL+NLLTYPFVREG+V  TLALKGGYYDFVNGSFELW L FG+SP  S+
Sbjct:  175 DWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKGGYYDFVNGSFELWELQFGISPVHSI 259          
BLAST of GO241897 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.586e-28
Identity = 57/82 (69.51%), Postives = 66/82 (80.49%), Query Frame = 1
Query:    4 WVKIGIPAKSKVLTEHGDKPFGDQCTYCEKEAVNVSLSNLLTYPFVREGLVNKTLALKGGYYDFVNGSFELWGLDFGLSPPL 249
            WVK+G+PAKSKV     +  F D CT CEKEAVNVSL NLLTYPFVR+ LVNK L+LKG +YDFVNG+F+LW LDFG+SP L
Sbjct:  107 WVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGAHYDFVNGAFDLWNLDFGISPSL 188          
The following BLAST results are available for this feature:
BLAST of GO241897 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CAHC_TOBAC7.508e-3683.53Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_PEA3.726e-3578.82Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]
CAHC_SPIOL1.084e-3478.82Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAHX_FLABI3.856e-3275.29Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHC_ARATH1.122e-3176.47Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAHX_FLAPR1.465e-3174.12Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABR1.465e-3174.12Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAH1_FLALI1.465e-3174.12Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAH2_ARATH2.763e-3074.12Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAH2_FLALI2.586e-2869.51Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]

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Properties
Property NameValue
Genbank description545 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 683 5, mRNA sequence.