GO241892

Overview
NameGO241892
Unique NameGO241892
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of GO241892 vs. ExPASy Swiss-Prot
Match: 5NG4_PINTA (Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.182e-30
Identity = 62/81 (76.54%), Postives = 72/81 (88.89%), Query Frame = 1 
Query:    1 GLIQFMIIAAIFERNLDAWIFHNGGEVFSILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASFALGEEFY 243
            G+IQF+IIAA FE +L+ W  H+GGE+F+ILYAG VASGIAF+VQIWCIDRGGPVFVAVYQPVQT+ VAIMAS  LGE+FY
Sbjct:  239 GVIQFLIIAAFFETDLEHWKIHSGGELFTILYAGFVASGIAFSVQIWCIDRGGPVFVAVYQPVQTIAVAIMASIILGEQFY 319
The following BLAST results are available for this feature:
BLAST of GO241892 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
5NG4_PINTA2.182e-3076.54Auxin-induced protein 5NG4 OS=Pinus taeda PE=2 SV=... [more]
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Properties
Property NameValue
Genbank description540 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 678 5, mRNA sequence.