GO241865

Overview
NameGO241865
Unique NameGO241865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7337 contig Csv1_Contig7337:7..898. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_ARATH (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Arabidopsis thaliana GN=At1g20050 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 4.986e-76
Identity = 136/208 (65.38%), Postives = 168/208 (80.77%), Query Frame = 3
Query:   54 VKKMSHPYVPRDLNLVDYAPNLLSPSTILAAYGLASLFVVSLIRVISGKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAA 677
            +++++HPYVPRDLNL  Y P  +S S+I++ Y  +SL VVSL+ ++ G+  K +K D+ LMCWW FTGLTH+ILEGYF FSPEF+KD +  YLAEVWKEYSKGDSRY  RD+ VV+VEGITAV+ GPASLL++YAIA  KSYSY+LQ AIS+ QLYG  VYF+T+ LEGDNFA + +YY  YYIGAN  WV+IPSLI+ RCWKKICAA
Sbjct:    1 MEELAHPYVPRDLNLPGYVPISMSMSSIVSIYLGSSLLVVSLVWLLFGR--KKAKLDKLLMCWWTFTGLTHVILEGYFVFSPEFFKDNTSAYLAEVWKEYSKGDSRYVGRDSAVVSVEGITAVIVGPASLLAIYAIAKEKSYSYVLQLAISVCQLYGCLVYFITAILEGDNFATNSFYYYSYYIGANCWWVLIPSLISFRCWKKICAA 206          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_ORYSJ (Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Oryza sativa subsp. japonica GN=Os01g0103600 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.951e-73
Identity = 133/211 (63.03%), Postives = 164/211 (77.73%), Query Frame = 3
Query:   69 HPYVPRDLNLVDYAPNLLSPSTILAAYGLASLFVVSLIRVISGKVPK-ISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQK 698
            HPY P +L+L  + P  LS + IL  Y   SLF++  + +ISG+  + +S TDRWLMCWWAFTGLTHII+EG F F+P F+ +++  Y  EVWKEYSKGDSRY ARD   V VEGITAVLEGPASLL+VYAIA+GKSYS+ILQF + LGQLYG  VYF+T+YL+G NF  SP+Y+  Y+IGAN+SWVVIP++IAIR WKKICAA   QG+K
Sbjct:    7 HPYAPAELHLPGFVPLQLSQAQILVPYLATSLFLLLAVWLISGRCSRRLSDTDRWLMCWWAFTGLTHIIIEGTFVFAPNFFSNQNPSYFDEVWKEYSKGDSRYVARDPATVTVEGITAVLEGPASLLAVYAIASGKSYSHILQFTVCLGQLYGCLVYFITAYLDGFNFWTSPFYFWAYFIGANSSWVVIPTMIAIRSWKKICAA--FQGEK 215          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_MOUSE (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Mus musculus GN=Ebp PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 4.419e-32
Identity = 77/219 (35.16%), Postives = 118/219 (53.88%), Query Frame = 3
Query:   69 HPYVPRDLNLVDYAPNLLSPSTILAAYGLAS--LFVVSLIRVISGKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEG--DNFAASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 713
            HPY PR L L ++ PN L  S IL      S  L V++ +      V  +    R  +CW+A     H+++EG+F+       +   F L+++WKEYSKGDSRY   D+ VV +E +TA L GP SL  V A    + + ++LQ  +S+GQ+YG  +YF+T   EG        P Y+  Y++  NA W+VIPS++ +   K + +A  +   K  K++
Sbjct:    9 HPYWPRHLKLDNFVPNDLPTSHILVGLFSISGGLIVITWLLSSRASVVPLGAGRRLALCWFAVCTFIHLVIEGWFSLYNGILLEDQAF-LSQLWKEYSKGDSRYILSDSFVVCMETVTACLWGPLSLWVVIAFLRQQPFRFVLQLVVSMGQIYGDVLYFLTELHEGLQHGEIGHPVYFWFYFVFLNAVWLVIPSILVLDAIKHLTSAQSVLDSKVMKIK 226          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_RAT (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Rattus norvegicus GN=Ebp PE=2 SV=3)

HSP 1 Score: 136.346 bits (342), Expect = 2.193e-31
Identity = 74/219 (33.79%), Postives = 117/219 (53.42%), Query Frame = 3
Query:   69 HPYVPRDLNLVDYAPNLLSPSTILAAYGLASLFVVSLIRVISGKVPKI--SKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 713
            HPY PR L L ++ PN L    IL      S  ++ +  ++S +V  +      R  +CW+A     H+++EG+F+F  E   +   F L+++WKEYSKGDSRY   D  +V +E +TA L GP SL  V A    + + ++LQ  +S+GQ+YG  +YF+T   +G        P Y+  Y++  NA W+VIP ++     K +  A  +   K  K++
Sbjct:    9 HPYWPRHLRLDNFVPNDLPTWHILVGLFSFSGVLIVITWLLSSRVSVVPLGTGRRLALCWFAVCTFIHLVIEGWFSFYHEILLEDQAF-LSQLWKEYSKGDSRYILSDGFIVCMESVTACLWGPLSLWVVIAFLRHQPFRFVLQLVVSVGQIYGDVLYFLTELRDGFQHGELGHPLYFWFYFVIMNAIWLVIPGILVFDAIKHLTNAQSMLDNKVMKIK 226          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_HUMAN (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Homo sapiens GN=EBP PE=1 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 4.573e-29
Identity = 75/221 (33.94%), Postives = 116/221 (52.49%), Query Frame = 3
Query:   69 HPYVPRDLNLVDYAPNLLSPSTILAAYGLASLFVVSLIRVISGK--VPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSG--FYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLIAIRCWKKICAAPQLQGQKKNKVR 713
            HPY P+ L L ++ PN      ILA     +  +V    ++SG+  V  +    R  +CW+A  G  H+++EG+F     +Y+D  G   +L+++WKEY+KGDSRY   D   V +E ITA L GP SL  V A        +ILQ  +S+GQ+YG  +YF+T + +G        P Y+  Y++  NA W+V+P ++ +   K +  A      K  K +
Sbjct:    9 HPYWPQHLRLDNFVPNDRPTWHILAGLFSVTGVLVVTTWLLSGRAAVVPLGTWRRLSLCWFAVCGFIHLVIEGWFVL---YYEDLLGDQAFLSQLWKEYAKGDSRYILGDNFTVCMETITACLWGPLSLWVVIAFLRQHPLRFILQLVVSVGQIYGDVLYFLTEHRDGFQHGELGHPLYFWFYFVFMNALWLVLPGVLVLDAVKHLTHAQSTLDAKATKAK 226          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBP_CAVPO (3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase OS=Cavia porcellus GN=EBP PE=1 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 7.800e-29
Identity = 72/196 (36.73%), Postives = 105/196 (53.57%), Query Frame = 3
Query:   69 HPYVPRDLNLVDYAPNLLSPSTILAA-YGLASLFVVSLIRVIS-GKVPKISKTDRWLMCWWAFTGLTHIILEGYFAFSPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNFA--ASPYYYNLYYIGANASWVVIPSLI 644
            HPY PR L L  + PN LS   I+   + +    VV++  + S   V  +    R  +CW+A     H+++EG+F    +       F L+++WKEY+KGDSRY   D  ++ +E IT VL GP SL +V A        Y+LQF ISLGQ+YG  +YF+T Y +G        P Y+  Y+   N  W+VIP ++
Sbjct:   10 HPYWPRHLRLDHFVPNDLSAWYIVTVLFTVFGALVVTMWLLSSRASVVPLGTWRRLSVCWFAVCAFVHLVIEGWFVLYQKAILGDQAF-LSQLWKEYAKGDSRYIIEDNFIICMESITVVLWGPLSLWAVIAFLRQHPSRYVLQFVISLGQIYGDLLYFLTEYRDGFQHGEMGHPIYFWFYFFFMNVLWLVIPGVL 204          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBPL_MOUSE (Emopamil-binding protein-like OS=Mus musculus GN=Ebpl PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.248e-18
Identity = 51/156 (32.69%), Postives = 83/156 (53.21%), Query Frame = 3
Query:  213 SKTDRWLMCWWAFTGLTHIILEGYFAFSPEF--YKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYLEGDNF--AASPYYYNLYYIGANASWVVIPSLIAIRCWKKI 668
            S  +RW++ W  +  L H +LEG F +        D  G  +A +WKEY K D+R+   D  VV++E +T VL+G  +L+ +YAI   K Y + +Q  + + +LYG  + F   +L G      +S  Y  +Y +  N  WV+IP L+  + W ++
Sbjct:   37 SAVERWVLAWLCYDSLVHFVLEGAFVYLSIVGNVADSQGL-IASLWKEYGKADTRWLYSDPTVVSLEILTVVLDGLLALVLIYAIVKEKYYRHFVQIVLCVCELYGCWMTFFPEWLVGSPSLNTSSWLYLWVYLVFFNGLWVLIPGLLLWQSWVEL 191          
BLAST of GO241865 vs. ExPASy Swiss-Prot
Match: EBPL_HUMAN (Emopamil-binding protein-like OS=Homo sapiens GN=EBPL PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 51/152 (33.55%), Postives = 77/152 (50.66%), Query Frame = 3
Query:  222 DRWLMCWWAFTGLTHIILEGYFAF-SPEFYKDKSGFYLAEVWKEYSKGDSRYAARDAGVVAVEGITAVLEGPASLLSVYAIATGKSYSYILQFAISLGQLYGTAVYFMTSYL-EGDNFAASPYYYN-LYYIGANASWVVIPSLIAIRCWKKI 668
            DR  + W  +  L H  LEG F + S       S   +A +WKEY K D+R+   D  +V+VE +T  L+G  +L  +YAI   K Y + LQ  + + +LYG  + F+  +L    N   S + Y  LY    N  WV+IP L+  + W ++
Sbjct:   40 DRGALIWLCYDALVHFALEGPFVYLSLVGNVANSDGLIASLWKEYGKADARWVYFDPTIVSVEILTVALDGSLALFLIYAIVKEKYYRHFLQITLCVCELYGCWMTFLPEWLTRSPNLNTSNWLYCWLYLFFFNGVWVLIPGLLLWQSWLEL 191          
The following BLAST results are available for this feature:
BLAST of GO241865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
EBP_ARATH4.986e-7665.38Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-i... [more]
EBP_ORYSJ3.951e-7363.03Probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-i... [more]
EBP_MOUSE4.419e-3235.163-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_RAT2.193e-3133.793-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_HUMAN4.573e-2933.943-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBP_CAVPO7.800e-2936.733-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase ... [more]
EBPL_MOUSE1.248e-1832.69Emopamil-binding protein-like OS=Mus musculus GN=E... [more]
EBPL_HUMAN3.399e-1633.55Emopamil-binding protein-like OS=Homo sapiens GN=E... [more]
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Properties
Property NameValue
Genbank description513 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 650 5, mRNA sequence.