GO241825

Overview
NameGO241825
Unique NameGO241825
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_MAIZE (Eukaryotic translation initiation factor 5 OS=Zea mays GN=EIF5 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 1.883e-75
Identity = 97/105 (92.38%), Postives = 100/105 (95.24%), Query Frame = 1
Query:  352 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCG 666
            MAL NIGA NR DAFYRYKMP+MITKIEGRGNGIKTN+VNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTG SLVNG+HDTAKLAGLLE FIKKYVQCYGCG
Sbjct:    1 MALQNIGASNRDDAFYRYKMPRMITKIEGRGNGIKTNVVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGISLVNGAHDTAKLAGLLEVFIKKYVQCYGCG 105          

HSP 2 Score: 103.219 bits (256), Expect = 1.883e-75
Identity = 55/81 (67.90%), Postives = 66/81 (81.48%), Query Frame = 3
Query:  666 NPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPE-SKSLKRQEAMRRAEKRDLR-SEAAG*GVEKIKKESRR 902
            NPETEI+I+KTQMI LKCAACGFVSDVDMRDKL TFILKNPPE  K  K ++AMRRAEK  L+  EAA    +K+KK++++
Sbjct:  106 NPETEILISKTQMISLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGGKDKKAMRRAEKERLKEGEAADEEQKKLKKDAKK 186          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5Z_ARATH (Probable eukaryotic translation initiation factor 5-2 OS=Arabidopsis thaliana GN=At1g77840 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 3.488e-71
Identity = 91/105 (86.67%), Postives = 99/105 (94.29%), Query Frame = 1
Query:  352 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCG 666
            MAL NIGA NR DAFYRYKMPKM+TK EG+GNGIKTNI+N V+IAKALARP SYTTKYFGCELGAQSKFDEKTGTSLVNG+H+T+KLAGLLENFIKK+VQCYGCG
Sbjct:    1 MALQNIGASNRNDAFYRYKMPKMVTKTEGKGNGIKTNIINNVEIAKALARPPSYTTKYFGCELGAQSKFDEKTGTSLVNGAHNTSKLAGLLENFIKKFVQCYGCG 105          

HSP 2 Score: 95.9005 bits (237), Expect = 3.488e-71
Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 3
Query:  666 NPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKSL-KRQEAMRRAEKRDLR-SEAAG*GVEKIKKESR 899
            NPETEIIITKTQM+ LKCAACGF+S+VDMRDKL  FILKNPPE K + K ++AMR+AEK  L+  E A     K+K + +
Sbjct:  106 NPETEIIITKTQMVNLKCAACGFISEVDMRDKLTNFILKNPPEQKKVSKDKKAMRKAEKERLKEGELADEEQRKLKAKKK 185          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5Y_ARATH (Probable eukaryotic translation initiation factor 5-1 OS=Arabidopsis thaliana GN=At1g36730 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.301e-51
Identity = 115/211 (54.50%), Postives = 135/211 (63.98%), Query Frame = 1
Query:  352 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGTQKLR**XXXXXXXXXXXXXXXXXXXXICETS*TLSF*RTHPSQ-KASKDKKQ*GGLRRET*EVRQPDEELKK*RKSQEEASSSKVGHQNAFSRKKAHVLLEFSAP 981
            MAL NIGA NR DAFYRYKMP+M+TKIEGRGNGIKTN+VNMV+IAKAL RPA+YTTKYFGCELGAQSKFDEK GTSLVNG+HDT+KLAGLLENFIKKYVQCYGCG  +                              T    +  P Q K+SKDKK     R E   +R+ +   ++ RK ++EA+S K       S+ K     + S P
Sbjct:    1 MALQNIGASNRDDAFYRYKMPRMMTKIEGRGNGIKTNVVNMVEIAKALGRPAAYTTKYFGCELGAQSKFDEKNGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEILITKTQMLQLKCAACGFLSDVDMRDKLTSFILKNPPEQKKSSKDKK--SMRRAEKERLREGEAADEEMRKLKKEAASKKKAATTGTSKDKVSKKKDHSPP 209          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_PHAVU (Eukaryotic translation initiation factor 5 OS=Phaseolus vulgaris GN=EIF5 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.262e-49
Identity = 117/205 (57.07%), Postives = 134/205 (65.37%), Query Frame = 1
Query:  352 MALLNIGADNRGDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGCGTQKLR**XXXXXXXXXXXXXXXXXXXXICETS*TLSF*RTHPS-QKASKDKKQ*GGLRRE-T*EVRQPDEELKK*RK--SQEEASSSKVG-HQNAFSRKK 951
            MAL NIGA N  DAFYRYKMP+M+TKIEGRGNGIKTN+VNMVDIAK LARPASYTTKYFGCELGAQSKFDEKTGTS VNG+H+TAKLAGLLE FIKKYVQCYGCG  +                              T    +  P  +K SKDKK      +E   E    DEELKK +K   ++ +SS+K G  ++  S+KK
Sbjct:    1 MALQNIGAGNSDDAFYRYKMPRMVTKIEGRGNGIKTNVVNMVDIAKRLARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGSSSAKDGTAKSTISKKK 205          

HSP 2 Score: 106.301 bits (264), Expect = 2.931e-22
Identity = 61/102 (59.80%), Postives = 75/102 (73.53%), Query Frame = 3
Query:  666 NPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPE-SKSLKRQEAMRRAEKRDLR-SEAAG*GVEKIKKESRR---SFLL*GGAPKRLLQEKGA 956
            NPETEI+ITK QMIQLKCAACGFVSDVDMRDKL TFI+KNPPE  K  K ++AMRRAEK  L+  EAA   ++K+KKE ++   S    G A   + ++KG+
Sbjct:  106 NPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGSSSAKDGTAKSTISKKKGS 207          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_RAT (Eukaryotic translation initiation factor 5 OS=Rattus norvegicus GN=Eif5 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.538e-38
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  388 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K    +VNGSH+  KL  +L+ FIKK+V C  C
Sbjct:   11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPEC 102          

HSP 2 Score: 47.3654 bits (111), Expect = 8.538e-38
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 3
Query:  666 NPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKSL---KRQEAMRRAEKRD 845
            NPET++ +  K Q I   C ACG+   +D   KL TFILKNPPE+  +   K+++  +  + +D
Sbjct:  104 NPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENSDIGTGKKEKEKKNRKGKD 167          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_MOUSE (Eukaryotic translation initiation factor 5 OS=Mus musculus GN=Eif5 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 8.538e-38
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  388 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K    +VNGSH+  KL  +L+ FIKK+V C  C
Sbjct:   11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPEC 102          

HSP 2 Score: 47.3654 bits (111), Expect = 8.538e-38
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 3
Query:  666 NPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKSL---KRQEAMRRAEKRD 845
            NPET++ +  K Q I   C ACG+   +D   KL TFILKNPPE+  +   K+++  +  + +D
Sbjct:  104 NPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENSDIGTGKKEKEKKNRKGKD 167          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_PONAB (Eukaryotic translation initiation factor 5 OS=Pongo abelii GN=EIF5 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.459e-37
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  388 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K    +VNGSH+  KL  +L+ FIKK+V C  C
Sbjct:   11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPEC 102          

HSP 2 Score: 45.8246 bits (107), Expect = 2.459e-37
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 3
Query:  666 NPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 797
            NPET++ +  K Q I   C ACG+   +D   KL TFILKNPPE+
Sbjct:  104 NPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_HUMAN (Eukaryotic translation initiation factor 5 OS=Homo sapiens GN=EIF5 PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 2.459e-37
Identity = 60/92 (65.22%), Postives = 73/92 (79.35%), Query Frame = 1
Query:  388 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            D FYRYKMP++I K+EG+GNGIKT IVNMVD+AKAL RP +Y TKYFGCELGAQ++FD K    +VNGSH+  KL  +L+ FIKK+V C  C
Sbjct:   11 DQFYRYKMPRLIAKVEGKGNGIKTVIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGFIKKFVLCPEC 102          

HSP 2 Score: 45.8246 bits (107), Expect = 2.459e-37
Identity = 23/45 (51.11%), Postives = 29/45 (64.44%), Query Frame = 3
Query:  666 NPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPES 797
            NPET++ +  K Q I   C ACG+   +D   KL TFILKNPPE+
Sbjct:  104 NPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPEN 148          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_CAEEL (Eukaryotic translation initiation factor 5 OS=Caenorhabditis elegans GN=C37C3.2 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.172e-37
Identity = 58/92 (63.04%), Postives = 67/92 (72.83%), Query Frame = 1
Query:  388 DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            D FYRYKMPK+  K+EG+GNGIKT I NM +IAKAL RP  Y TKYFGCELGAQ+ FD K    +VNG HD  KL  +L+ FIKK+V C  C
Sbjct:   11 DPFYRYKMPKLSAKVEGKGNGIKTVISNMSEIAKALERPPMYPTKYFGCELGAQTNFDAKNERYIVNGEHDANKLQDILDGFIKKFVLCKSC 102          

HSP 2 Score: 51.6026 bits (122), Expect = 4.172e-37
Identity = 22/43 (51.16%), Postives = 32/43 (74.42%), Query Frame = 3
Query:  666 NPETEIIITKTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPE 794
            NPET++ + K   I+ KC ACG   D+D++ KL+TFI+KNPP+
Sbjct:  104 NPETQLFVRKNN-IKSKCKACGCSFDIDLKHKLSTFIMKNPPK 145          
BLAST of GO241825 vs. ExPASy Swiss-Prot
Match: IF5_DROME (Eukaryotic translation initiation factor 5 OS=Drosophila melanogaster GN=eIF5 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 7.640e-36
Identity = 61/106 (57.55%), Postives = 78/106 (73.58%), Query Frame = 1
Query:  352 MALLNIGADNRG--DAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSLVNGSHDTAKLAGLLENFIKKYVQCYGC 663
            MA +N+   NR   D FYRYKMP++  K+EG+GNGIKT +VNM ++A+A+ RPA+Y TKYFGCELGAQ+ FD K    +VNGSHD  KL  LL+ FI+K+V C  C
Sbjct:    1 MATVNV---NRSVTDIFYRYKMPRLQAKVEGKGNGIKTVLVNMAEVARAIGRPATYPTKYFGCELGAQTLFDHKNERFVVNGSHDVNKLQDLLDGFIRKFVLCPEC 103          

HSP 2 Score: 45.8246 bits (107), Expect = 7.640e-36
Identity = 24/70 (34.29%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  666 NPETEIIIT-KTQMIQLKCAACGFVSDVDMRDKLNTFILKNPPESKSLKRQEAM---RRAEKRDLRSEAA 863
            NPET + ++ K Q I   C ACGF   + +  K+NTFI+KNPP      +  ++   +R+ K+  +++ A
Sbjct:  105 NPETNLTVSAKNQTISQSCKACGFHGLLKVNHKVNTFIVKNPPSLNPAAQGSSLTEGKRSRKQKQKNDNA 174          
The following BLAST results are available for this feature:
BLAST of GO241825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
IF5_MAIZE1.883e-7592.38Eukaryotic translation initiation factor 5 OS=Zea ... [more]
IF5Z_ARATH3.488e-7186.67Probable eukaryotic translation initiation factor ... [more]
IF5Y_ARATH2.301e-5154.50Probable eukaryotic translation initiation factor ... [more]
IF5_PHAVU1.262e-4957.07Eukaryotic translation initiation factor 5 OS=Phas... [more]
IF5_RAT8.538e-3865.22Eukaryotic translation initiation factor 5 OS=Ratt... [more]
IF5_MOUSE8.538e-3865.22Eukaryotic translation initiation factor 5 OS=Mus ... [more]
IF5_PONAB2.459e-3765.22Eukaryotic translation initiation factor 5 OS=Pong... [more]
IF5_HUMAN2.459e-3765.22Eukaryotic translation initiation factor 5 OS=Homo... [more]
IF5_CAEEL4.172e-3763.04Eukaryotic translation initiation factor 5 OS=Caen... [more]
IF5_DROME7.640e-3657.55Eukaryotic translation initiation factor 5 OS=Dros... [more]

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Properties
Property NameValue
Genbank description473 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 610 5, mRNA sequence.