GO241778

Overview
NameGO241778
Unique NameGO241778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13769 contig Csv1_Contig13769:1..839. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241778 vs. ExPASy Swiss-Prot
Match: CXIP4_ARATH (CAX-interacting protein 4 OS=Arabidopsis thaliana GN=CXIP4 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 6.864e-48
Identity = 95/126 (75.40%), Postives = 103/126 (81.75%), Query Frame = 1 
Query:  109 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSKNSAQPKPSSNEPDADNPYNSYQGLLALARITNTNADEARGACKKCGRVGHLTFQCRNFLSVKEDKEKDQEAIQAAVLSELD 486
            MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +   + Q K      D +N Y S+QGLLALARIT +N DEARG+CKKCGRVGHLTFQCRNFLS KEDKEKD  AI+AAVLS L+
Sbjct:    1 MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKEEPKTTQQKTE----DPENSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEAAVLSGLE 122
The following BLAST results are available for this feature:
BLAST of GO241778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CXIP4_ARATH6.864e-4875.40CAX-interacting protein 4 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank description426 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 562 5, mRNA sequence.