GO241767

Overview
NameGO241767
Unique NameGO241767
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.858e-76
Identity = 139/200 (69.50%), Postives = 163/200 (81.50%), Query Frame = 2
Query:  104 YDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 703
            YDPSP QD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ N GKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 2.858e-76
Identity = 139/200 (69.50%), Postives = 163/200 (81.50%), Query Frame = 2
Query:  104 YDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 703
            YDPSP QD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ N GKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 3.733e-76
Identity = 139/200 (69.50%), Postives = 163/200 (81.50%), Query Frame = 2
Query:  104 YDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 703
            YDPSP QD CVAI++PK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ N GKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.853e-75
Identity = 144/225 (64.00%), Postives = 173/225 (76.89%), Query Frame = 2
Query:   29 LITMKAIQFLIGFAVXXXXXXXXXXYDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 703
            LIT+ A+  +I FA           YDPSP QD CVAI++ K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVL  GD FVFPIG+IHFQ N GKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:    9 LITLSAL--VISFA---------EAYDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 4.127e-75
Identity = 137/199 (68.84%), Postives = 161/199 (80.90%), Query Frame = 2
Query:  107 DPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFIN 703
            DPSP QD CVAI + K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ N GKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LA+AFQLD   VKDL+ KF N
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.328e-73
Identity = 137/220 (62.27%), Postives = 167/220 (75.91%), Query Frame = 2
Query:   38 MKAIQFLIGFAVXXXXXXXXXXYDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 697
            M+  Q L+ FA+          YDPSP QD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.734e-73
Identity = 137/220 (62.27%), Postives = 167/220 (75.91%), Query Frame = 2
Query:   38 MKAIQFLIGFAVXXXXXXXXXXYDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 697
            M+  Q L+ FA+          YDPSP QD CVAI++ K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.045e-73
Identity = 136/220 (61.82%), Postives = 167/220 (75.91%), Query Frame = 2
Query:   38 MKAIQFLIGFAVXXXXXXXXXXYDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 697
            M+  Q LI FA+          YDPSP QD CVAI++ K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N GK  A+A++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   VK+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 6.167e-71
Identity = 133/198 (67.17%), Postives = 156/198 (78.79%), Query Frame = 2
Query:  104 YDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 697
            YDPSP QD CVA+++   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EIL+V+EGTL VGFVTS+Q NN L SKVL  GD FVFPIG+IHFQ N G+TNAVA++ L SQ PG ITIADAVFG+ P I P+ LAKAFQLD   VK L+ +F
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARF 221          
BLAST of GO241767 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.886e-68
Identity = 125/222 (56.31%), Postives = 159/222 (71.62%), Query Frame = 2
Query:   32 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPRQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNTGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 697
            +T+K++ FL   ++           DPSP QD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EIL+V +GTL VGF++S+Q  N L +K LN GD FVFP GLIHFQFN G T AVA +AL+SQ  G ITIA+ +FG+ P ++P+ LA+AFQ+D   V++LQ +F
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
The following BLAST results are available for this feature:
BLAST of GO241767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH2.858e-7669.50Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH2.858e-7669.50Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH3.733e-7669.50Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH1.853e-7564.00Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH4.127e-7568.84Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH1.328e-7362.27Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH1.734e-7362.27Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH5.045e-7361.82Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH6.167e-7167.17Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH4.886e-6856.31Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank description415 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 551 5, mRNA sequence.