GO241735

Overview
NameGO241735
Unique NameGO241735
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6307 contig Csv1_Contig6307:131..1004. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.113e-67
Identity = 123/139 (88.49%), Postives = 133/139 (95.68%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+GEPT++YEDFAASLP  ECRYAVYD+DFVTAENCQKSRIFFIAW PDTARVRSKMIYASSKDRFKRELDGIQVELQA DP+EMGLDV + RAN
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.545e-66
Identity = 122/142 (85.92%), Postives = 134/142 (94.37%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN*IK 500
            MANAASGMAVHDDCKLKFLELKAKRTYRFI++KIEEKQK+V+VEKLGEPT++YEDF A LP +ECRYAVYD+DF+T EN QKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EMGLDVF+ RA  I+
Sbjct:    1 MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLPADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGIE 142          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 2.231e-65
Identity = 120/139 (86.33%), Postives = 130/139 (93.53%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQVIVEK+GEP  TYEDFAASLP +ECRYA+YD+DFVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDV K R N
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.231e-65
Identity = 118/139 (84.89%), Postives = 132/139 (94.96%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAVHDDCKL+FLELKAKRT+RFIV+KIEEKQKQV+VEK+G+P QTYE+FAA LP +ECRYA+YD+DFVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVF+ RAN
Sbjct:    1 MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 2.088e-63
Identity = 117/139 (84.17%), Postives = 130/139 (93.53%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAVHDDCKLKF+ELKAKRT+R IV+KIE+KQ  VIVEKLGEP Q+Y+DFAASLP ++CRY +YD+DFVTAENCQKS+IFFIAWSPDTA+VR KMIYASSKDRFKRELDGIQVELQATDP+EMGLDVFK R N
Sbjct:    1 MANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIEDKQ--VIVEKLGEPEQSYDDFAASLPADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 241.506 bits (615), Expect = 4.652e-63
Identity = 114/139 (82.01%), Postives = 129/139 (92.81%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAV D+CKLKFLELKAKRTYRFI++KI+EK+K V+VEK+GEP   Y+DFAASLP  ECRYA++DYDFVT ENCQKS+IFFIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVELQATDP+E+GLDV + RAN
Sbjct:    1 MANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF3_ARATH (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana GN=ADF3 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.309e-62
Identity = 114/139 (82.01%), Postives = 129/139 (92.81%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MANAASGMAVHDDCKLKF+ELK KRT+RFI++KIEE QKQVIVEK+GEP QT+ED AASLP +ECRYA++D+DFV++E   +SRIFF+AWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVFK RAN
Sbjct:    1 MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLPADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFKSRAN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 9.700e-61
Identity = 110/139 (79.14%), Postives = 124/139 (89.21%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MAN+ASGM V D+CKLKFLELKAKR YRFIVFKI+EK +QV+++KLG P +TYEDF  S+P +ECRYAVYDYDF T ENCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM LD+ K R N
Sbjct:    1 MANSASGMHVSDECKLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.829e-59
Identity = 106/139 (76.26%), Postives = 126/139 (90.65%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 491
            MAN+ASGM V+D+CK+KFLELKAKRTYRFIVFKI+EK +QV +EKLG P +TY+DF +S+P +ECRYAVYD+DF T +NCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRE++GIQVELQATDPSEM LD+ K R N
Sbjct:    1 MANSASGMHVNDECKIKFLELKAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of GO241735 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.506e-58
Identity = 104/138 (75.36%), Postives = 127/138 (92.03%), Query Frame = 3
Query:   75 MANAASGMAVHDDCKLKFLELKAKRTYRFIVFKIEEKQKQVIVEKLGEPTQTYEDFAASLPTEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 488
            M+N+ASGMAV D+CKLKFLELKAKR++RFIVFKI EK +QV+V++LG+P ++Y+DF A LP +ECRYAV+D+DFVT ENCQKS+IFFI+W+PDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:    1 MSNSASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLPADECRYAVFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
The following BLAST results are available for this feature:
BLAST of GO241735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
ADF1_PETHY3.113e-6788.49Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF2_PETHY1.545e-6685.92Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF4_ARATH2.231e-6586.33Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF1_ARATH2.231e-6584.89Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF2_ARATH2.088e-6384.17Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF7_ORYSJ4.652e-6382.01Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF3_ARATH2.309e-6282.01Actin-depolymerizing factor 3 OS=Arabidopsis thali... [more]
ADF10_ARATH9.700e-6179.14Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF8_ARATH1.829e-5976.26Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF1_ORYSJ4.506e-5875.36Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]

Pages

back to top
Properties
Property NameValue
Genbank description383 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 514 5, mRNA sequence.