GO241728

Overview
NameGO241728
Unique NameGO241728
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2108 contig Csv1_Contig2108:4..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: ALTA7_ALTAL (Minor allergen Alt a 7 OS=Alternaria alternata GN=ALTA7 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.919e-44
Identity = 101/194 (52.06%), Postives = 126/194 (64.95%), Query Frame = 1
Query:   79 MATKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK-SDVPIIT-PNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMF-EMEKVKGGSPYGAGTF-AGDGSRQPTELELEQAFHQGK 648
            MA K+ IVYYSMYGH++K+A+   KG     G +AKL+QV ETLP+EVL KM APPK S VP++  P  L E DG +FG PTR+G   AQFK F D TG  W+     GK AG+F             A+T+++ LV HG I+VP+GY     M   +++V GGSP+GAGTF AGDGSRQP+ELEL  A  QGK
Sbjct:    1 MAPKIAIVYYSMYGHIKKMADAELKGIQEAGG-DAKLFQVAETLPQEVLDKMYAPPKDSSVPVLEDPAVLEEFDGILFGIPTRYGNFPAQFKTFWDKTGKQWQQGAFWGKYAGVFVSTGTLGGGQETTAITSMSTLVDHGFIYVPLGYKTAFSMLANLDEVHGGSPWGAGTFSAGDGSRQPSELELNIAQAQGK 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSF (Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.489e-43
Identity = 98/198 (49.49%), Postives = 119/198 (60.10%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFAG-DGSRQPTELELEQAFHQGKHIAGIA 666
            KV +VYYSMYGH+ ++AE I +GA  V G E  L +VPETL  +VL KM A       S +PI T +ELAEAD  +FG PTRFG M  Q + FLDATGGLW    L GK   +F              L+  T L+HHGM+ V + Y F  G    +++ GGSPYGA T AG  G RQPTE EL  A +QGKH+A IA
Sbjct:    2 KVLVVYYSMYGHIHRMAEAIVEGAKEVVGAEVVLRRVPETLSHDVLEKMGAVEAQRSMSHIPICTVDELAEADAVIFGSPTRFGNMCGQMRQFLDATGGLWVKGSLIGKVGSVFASSNTQHGGQESTILSFHTTLLHHGMVIVGLPYAF-QGQMRNDEITGGSPYGASTVAGTQGERQPTENELAAARYQGKHVASIA 198          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_DESMR (Flavoprotein wrbA OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=wrbA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.945e-43
Identity = 97/198 (48.99%), Postives = 121/198 (61.11%), Query Frame = 1
Query:   91 VYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPK----SDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIAR 669
            V IVYYS+YGHV  +A+ + +G   V G+ A L +VPETL EEV+GKM A       S VP  T  EL +AD  VFG PTRFG M  Q + FLDATG +W    L GKP G+F              ++ I  L+HHGMI V + Y+F AG   +++V GGSPYGA T A GDGSR P+E EL+ A  QG+HIA + R
Sbjct:    3 VLIVYYSLYGHVAAMAQAVAEGVHQVPGMTATLRRVPETLSEEVIGKMGATEAQKALSHVPACTLEELEDADAIVFGTPTRFGNMCGQMRQFLDATGQIWMRGGLVGKPGGVFCSTATQHGGQETTLMSFIQTLLHHGMIVVGLPYSF-AGQMRLDEVTGGSPYGATTIAGGDGSRMPSENELDAARFQGRHIADVTR 199          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_SERP5 (Flavoprotein wrbA OS=Serratia proteamaculans (strain 568) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.333e-43
Identity = 91/193 (47.15%), Postives = 117/193 (60.62%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGI 663
            K+ ++YYSMYGH+E LAE + +GA  V GVE  L +VPET+P E   K         P+ +P ELA+ DG +FG PTRFG MA Q + FLD TGGLW +  L GK  G  +              +  T L HHG I VPIGY     +F++  V+GG+PYGA T A GDGSRQP++ EL  A +QG+H+A I
Sbjct:    3 KILVLYYSMYGHIETLAEAVAEGARRVSGVEVTLKRVPETIPAEAFAKAGGKQDQKAPVASPQELADYDGIIFGTPTRFGNMAGQMRTFLDQTGGLWASGALYGK-VGSVFSSTGTGGGQEHTITSTWTTLAHHGFIIVPIGYA-TPELFDVSHVRGGTPYGATTIAGGDGSRQPSQEELTIARYQGEHVAKI 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_SHIDS (Flavoprotein wrbA OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=wrbA PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.391e-43
Identity = 90/195 (46.15%), Postives = 125/195 (64.10%), Query Frame = 1
Query:   85 TKVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            TKV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    2 TKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_SALTI (Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 7.391e-43
Identity = 88/194 (45.36%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            K+ ++YYSMYGH+E +A  + +GA  V+G E  + +VPET+P E+  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK  G+F               T  T L HHGM+ VPIGY+    +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    3 KILVLYYSMYGHIETMAHAVAEGAKKVDGAEVIIKRVPETMPPEIFAKAGGKTQN-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLGGVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYS-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_SHIFL (Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=3 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_SHIF8 (Flavoprotein wrbA OS=Shigella flexneri serotype 5b (strain 8401) GN=wrbA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_ECOUT (Flavoprotein wrbA OS=Escherichia coli (strain UTI89 / UPEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
BLAST of GO241728 vs. ExPASy Swiss-Prot
Match: WRBA_ECOSM (Flavoprotein wrbA OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=wrbA PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.809e-42
Identity = 89/194 (45.88%), Postives = 124/194 (63.92%), Query Frame = 1
Query:   88 KVYIVYYSMYGHVEKLAEEIKKGASSVEGVEAKLWQVPETLPEEVLGKMSAPPKSDVPIITPNELAEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGMFYXXXXXXXXXXXXALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTFA-GDGSRQPTELELEQAFHQGKHIAGIA 666
            KV ++YYSMYGH+E +A  + +GAS V+G E  + +VPET+P ++  K     ++  P+ TP ELA+ D  +FG PTRFG M+ Q + FLD TGGLW +  L GK A +F               T  T L HHGM+ VPIGY     +F++ +V+GG+PYGA T A GDGSRQP++ EL  A +QG+++AG+A
Sbjct:    3 KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMPPQLFEKAGGKTQT-APVATPQELADYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITST-WTTLAHHGMVIVPIGYA-AQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLA 193          
The following BLAST results are available for this feature:
BLAST of GO241728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
ALTA7_ALTAL3.919e-4452.06Minor allergen Alt a 7 OS=Alternaria alternata GN=... [more]
WRBA_GEOSF1.489e-4349.49Flavoprotein wrbA OS=Geobacter sp. (strain FRC-32)... [more]
WRBA_DESMR1.945e-4348.99Flavoprotein wrbA OS=Desulfovibrio magneticus (str... [more]
WRBA_SERP54.333e-4347.15Flavoprotein wrbA OS=Serratia proteamaculans (stra... [more]
WRBA_SHIDS7.391e-4346.15Flavoprotein wrbA OS=Shigella dysenteriae serotype... [more]
WRBA_SALTI7.391e-4345.36Flavoprotein wrbA OS=Salmonella typhi GN=wrbA PE=3... [more]
WRBA_SHIFL2.809e-4245.88Flavoprotein wrbA OS=Shigella flexneri GN=wrbA PE=... [more]
WRBA_SHIF82.809e-4245.88Flavoprotein wrbA OS=Shigella flexneri serotype 5b... [more]
WRBA_ECOUT2.809e-4245.88Flavoprotein wrbA OS=Escherichia coli (strain UTI8... [more]
WRBA_ECOSM2.809e-4245.88Flavoprotein wrbA OS=Escherichia coli (strain SMS-... [more]

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Properties
Property NameValue
Genbank description376 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 506 5, mRNA sequence.