GO241688

Overview
NameGO241688
Unique NameGO241688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8915 contig Csv1_Contig8915:52..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 8.988e-41
Identity = 81/99 (81.82%), Postives = 88/99 (88.89%), Query Frame = 1
Query:   88 MEFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 384
            MEFT  QL QYNGTD SKPIYVAIKGRVFDVTTGKSFYG  G Y+MFAGKDASRAL KMSKN++DV+PSL+GLTEKE+  L+DWE KFEAKYPVVGRVV
Sbjct:    1 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.703e-23
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 1
Query:   91 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 381
            E T  +L QY+G+DP KP+ +AIK +++DVT  + FYGP G YA+FAGKDASRALAKMS  + D+T  + GL   E+  L DWE KF +KY  VG V
Sbjct:   74 EITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTV 170          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.452e-23
Identity = 51/97 (52.58%), Postives = 67/97 (69.07%), Query Frame = 1
Query:   91 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRV 381
            E T  +L  Y+G+D  KP+ +AIKG+++DV+  + FYGP G YA+FAGKDASRALAKMS  D D+T  + GL   E+  L DWE KF +KY  VG +
Sbjct:   70 EITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTI 166          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.926e-20
Identity = 48/95 (50.53%), Postives = 66/95 (69.47%), Query Frame = 1
Query:   94 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 375
            FT  +L +Y+G +  +PIY+A+KG VFDVT+GK FYG    Y   AGKD+SR +AKMS +  D+T  + GLT KE+  L D + K ++AKYP+VG
Sbjct:   46 FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVG 140          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.142e-19
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 1
Query:    4 LIFLTSLPLLSARTATNQTRRPSFVHSSME-FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 375
            ++ L  +P+ SA     QT RP+     +  FT  +L +Y G +  +PIY+A+KG VFDVT+GK FYG    Y   AGKD+SR +AKMS +  D+T    GLT KE+  L D + K ++AKYP+VG
Sbjct:   17 VLALALVPVPSAWAG--QTPRPAERGPPVRLFTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVG 140          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: DAP1_SCHPO (Cytochrome P450 regulator dap1 OS=Schizosaccharomyces pombe GN=dap1 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.650e-18
Identity = 55/142 (38.73%), Postives = 81/142 (57.04%), Query Frame = 1
Query:    4 LIFLTSLPLLSARTATNQTRRPSFVHSS-------MEFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDG--------LTEKEMGVLSDWEKKFEAKYPVVGRVV 384
            ++F+ +L L    T   +    SF+ S         ++TPA+L +YNG+  S  +++AIKG V++VT G  FYGP+G Y+ FAG DASR LAK S  DD+  P  D         L ++E   L+DW+  F+ KY  VGR++
Sbjct:    6 VVFIVTLFLYLLITRWRRKNEKSFIASEEPKQPEWRDYTPAELKEYNGSKNSL-VFLAIKGTVYNVTMGSKFYGPQGPYSAFAGHDASRGLAKNS-FDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGRLI 145          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: NENF_HUMAN (Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.675e-18
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 1
Query:   94 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 375
            FT  +L +Y G +  +PIY+A+KG VFDVT+GK FYG    Y    GKD++R +AKMS +  D+T    GLT KE+  L + + K ++AKYP+VG
Sbjct:   47 FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAKELEALDEVFTKVYKAKYPIVG 141          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: DAP1_YEAST (Damage response protein 1 OS=Saccharomyces cerevisiae GN=DAP1 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.069e-17
Identity = 48/118 (40.68%), Postives = 70/118 (59.32%), Query Frame = 1
Query:   49 TNQTRRPSFVHSSMEFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMS------KNDDDVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 384
            TN + + S    +  F P  L ++NG D  K I++AI+G+V+D T G+ FYGP G Y  FAG DASR LA  S      K+ D     LD LT++++  L +W++ FE KYP +G ++
Sbjct:   29 TNDSNKGSEPVVAGNFFPRTLSKFNGHDDEK-IFIAIRGKVYDCTRGRQFYGPSGPYTNFAGHDASRGLALNSFDLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTLI 145          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.396e-17
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1
Query:   94 FTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDDDVTPSLDGLTEKEMGVLSD-WEKKFEAKYPVVG 375
            FT  +L +Y G +  +PIY+A+KG VFDVT+GK FYG    Y    GKD++R +AKMS +  D+T    GLT +E+  L D + + ++AKYP+VG
Sbjct:   44 FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVG 138          
BLAST of GO241688 vs. ExPASy Swiss-Prot
Match: PGRC1_PONAB (Membrane-associated progesterone receptor component 1 OS=Pongo abelii GN=PGRMC1 PE=2 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.544e-16
Identity = 45/101 (44.55%), Postives = 63/101 (62.38%), Query Frame = 1
Query:   91 EFTPAQLIQYNGTDPSKPIYVAIKGRVFDVTTGKSFYGPRGAYAMFAGKDASRALAKMSKNDD---DVTPSLDGLTEKEMGVLSDWEKKFEAKYPVVGRVV 384
            +FTPA+L +++G    + I +AI G+VFDVT G+ FYGP G Y +FAG+DASR LA    + +   D    L  LT  +   LSDWE +F  KY  VG+++
Sbjct:   72 DFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLL 171          
The following BLAST results are available for this feature:
BLAST of GO241688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
SBP3_ARATH8.988e-4181.82Probable steroid-binding protein 3 OS=Arabidopsis ... [more]
MSBP1_ARATH1.703e-2354.64Membrane steroid-binding protein 1 OS=Arabidopsis ... [more]
MSBP2_ARATH8.452e-2352.58Membrane steroid-binding protein 2 OS=Arabidopsis ... [more]
NENF_RAT3.926e-2050.53Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1[more]
NENF_MOUSE1.142e-1944.44Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1[more]
DAP1_SCHPO1.650e-1838.73Cytochrome P450 regulator dap1 OS=Schizosaccharomy... [more]
NENF_HUMAN3.675e-1847.37Neudesin OS=Homo sapiens GN=NENF PE=1 SV=1[more]
DAP1_YEAST1.069e-1740.68Damage response protein 1 OS=Saccharomyces cerevis... [more]
NENF_BOVIN1.396e-1746.32Neudesin OS=Bos taurus GN=NENF PE=2 SV=1[more]
PGRC1_PONAB1.544e-1644.55Membrane-associated progesterone receptor componen... [more]

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Properties
Property NameValue
Genbank description336 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 465 5, mRNA sequence.