GO241680

Overview
NameGO241680
Unique NameGO241680
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241680_ssr126 microsatellite GO241680_ssr126:126..137. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6924 contig Csv1_Contig6924:8..765. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNJ10_ARATH (Chaperone protein dnaJ 10 OS=Arabidopsis thaliana GN=ATJ10 PE=2 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.621e-52
Identity = 109/178 (61.24%), Postives = 136/178 (76.40%), Query Frame = 2
Query:  230 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEV--EEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDGRADEFVKWANAEARRLSGAA 757
            MVK+T YYDVLGV+  A+ +EIKKAYY+KAR VHPDKNP DP+AA NFQVLGEAYQVLSD  +R+AYD  GK GI  D+++D AA+F M+FGSE FE YIGQLA+A+MAS+++  E D+ D +    KIQEK+R +QKERE+KL  ILK+ L  +V  + DEF+  A AE  RLS AA
Sbjct:    1 MVKETEYYDVLGVSPTATESEIKKAYYIKARQVHPDKNPNDPQAAHNFQVLGEAYQVLSDSGQRQAYDACGKSGISTDAIIDPAAIFAMLFGSELFEGYIGQLAMASMASLDIFTEGDQFDTK----KIQEKLRIVQKEREDKLAQILKDRLNEYVINK-DEFISNAEAEVARLSNAA 173          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: CAJ1_YEAST (Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.708e-28
Identity = 74/194 (38.14%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  230 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE-GIPQDSMVDAAAVFGMIFGSEYFEDYIGQLAL------------------ATMASVEVEEDKQDIEVYKHKIQE----KMRAMQKEREEKLITILKNHLEPFVDGRADEFVKWANAEARR 742
            MVK+T YYD+LG+  +A+P EIKKAY  KA   HPDK+P DP A   FQ +GEAYQVLSDP  R  YD+ GKE  +PQ    DA+  F  IFG + F+D+IG+ +L                        E  ++  D  + KH   +    K   + KE+ EKL+ + K   E  +  + DE  +  N +  R
Sbjct:    1 MVKETEYYDILGIKPEATPTEIKKAYRRKAMETHPDKHPDDPDAQAKFQAVGEAYQVLSDPGLRSKYDQFGKEDAVPQQGFEDASEYFTAIFGGDGFKDWIGEFSLFKELNEATEMFGKEDEEGTAATETEKADESTDGGMVKHDTNKAESLKKDKLSKEQREKLMEMEKKRREDMMK-QVDELAEKLNEKISR 193          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DJP1_YEAST (DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN=DJP1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.801e-26
Identity = 65/130 (50.00%), Postives = 80/130 (61.54%), Query Frame = 2
Query:  230 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHG-KEGIPQDSMVDAAAVFGMIFGSEYFEDYIGQLAL--------ATMASVEVEEDKQDIE 592
            MV DT YYD+LGV+  AS  EIKKAY  K+   HPDKNP DP A + FQ + EAYQVL D + R  YDK+G KE IPQ    DAA  F +IFG + F  YIG+L L           A  E E++K+++E
Sbjct:    1 MVVDTEYYDLLGVSTTASSIEIKKAYRKKSIQEHPDKNPNDPTATERFQAISEAYQVLGDDDLRAKYDKYGRKEAIPQGGFEDAAEQFSVIFGGDAFASYIGELMLLKNLQKTEELNAEDEAEKEKENVE 130          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: YHXB_SCHPO (Uncharacterized J domain-containing protein C3E7.11c OS=Schizosaccharomyces pombe GN=SPBC3E7.11c PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.439e-22
Identity = 61/169 (36.09%), Postives = 91/169 (53.85%), Query Frame = 2
Query:  233 VKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAK-NFQVLGEAYQVLSDPEKREAYDKHGKEG-IPQDSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKLITILKNHLEPFVDGRADEFVKWANAE 733
            V D  YYD+L ++VDA    IKK+Y   A + HPDKN  +P+AA+  FQ L EAYQVLSDP+ RE YDK GK G +P     DA   F  +FG + F DY+G+L L       + E+ +   +     +E  + +Q+E  ++   +L+  ++       D+   W   +
Sbjct:    5 VVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQVLSDPKLREKYDKLGKVGAVPDAGFEDAFEFFKNLFGGDSFRDYVGELNLLKELCKMINEEPELKAI--EDTEESKKQLQREESKEADRLLQERIDVLCKNLLDKLSIWTETD 171          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: YAY1_SCHPO (Uncharacterized J domain-containing protein C4H3.01 OS=Schizosaccharomyces pombe GN=SPAC4H3.01 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.140e-19
Identity = 53/138 (38.41%), Postives = 82/138 (59.42%), Query Frame = 2
Query:  239 DTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPK-AAKNFQVLGEAYQVLSDPEKREAYDKHGKE-GIPQDSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKERE 646
            DT YYD+LG++ DA+  +IKKAY   A   HPDKNP DP+ A++ FQ + EAYQVL D + R  YD+ GKE  +P+    DA   F  +FG   F +++G+L+      V+    ++D  V + ++ +K + + +  E
Sbjct:    6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQFGKEKAVPEQGFTDAYDFFTNLFGGAPFREWVGELSF-----VKEMFREEDSAVEQGQMNDKQQLLLESSE 138          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLAB (Chaperone protein dnaJ OS=Chlamydophila abortus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.944e-19
Identity = 55/116 (47.41%), Postives = 68/116 (58.62%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE----------GIPQDSMVDAAAVFGMIFGSE------YFEDYIGQLALA 547
            YYDVLGV+  ASP EIKK+Y   A   HPDKNPGD +A K F+ + EAY+VLSDP+KRE+YD++GK+          G    +M DA   F   FG E      +FE   G L  A
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKDGPFAGAGGFGGAGMSNMEDALRTFMGAFGGELGGSGSFFEGLFGGLGEA 118          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLFF (Chaperone protein dnaJ OS=Chlamydophila felis (strain Fe/C-56) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 55/116 (47.41%), Postives = 67/116 (57.76%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKE----------GIPQDSMVDAAAVFGMIFGSE------YFEDYIGQLALA 547
            YYDVLGV+  ASP EIKKAY   A   HPDKNPGD +A K F+ + EAY+VLSD +KRE+YD++GK+          G    +M DA   F   FG E      +FE   G L  A
Sbjct:    3 YYDVLGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFGGAGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEA 118          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLCV (Chaperone protein dnaJ OS=Chlamydophila caviae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19
Identity = 55/117 (47.01%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI-----------PQDSMVDAAAVFGMIFGSE------YFEDYIGQLALA 547
            YYDVLGV+  ASP EIKK+Y   A   HPDKNPGD +A K F+ + EAY+VLSDP+KRE+YD++GK G               +M DA   F   FG E      +FE   G L  A
Sbjct:    3 YYDVLGVSKTASPEEIKKSYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDPQKRESYDRYGKNGPFAGAGGFGGMGGMGNMEDALRTFMGAFGGEFGGGGSFFEGLFGGLGEA 119          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: MAS5_YEAST (Mitochondrial protein import protein MAS5 OS=Saccharomyces cerevisiae GN=YDJ1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 2
Query:  230 MVKDTAYYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGIPQDSMVDAAAVFGMIFGSEYFEDYIGQLALATMASVEVEEDKQDIEVYKHKIQEKMRAMQKEREEKL 655
            MVK+T +YD+LGV V A+  EIKKAY   A   HPDKNP + +AA+ F+    AY++LSDPEKR+ YD+ G++G+            G  FG + F  + G          +     Q  +  KH+I   +  + K R  KL
Sbjct:    1 MVKETKFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPSE-EAAEKFKEASAAYEILSDPEKRDIYDQFGEDGLSGAGGAGGFPGGGFGFGDDIFSQFFG------AGGAQRPRGPQRGKDIKHEISASLEELYKGRTAKL 135          
BLAST of GO241680 vs. ExPASy Swiss-Prot
Match: DNAJ_SALRD (Chaperone protein dnaJ OS=Salinibacter ruber (strain DSM 13855) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.067e-17
Identity = 41/69 (59.42%), Postives = 52/69 (75.36%), Query Frame = 2
Query:  248 YYDVLGVNVDASPAEIKKAYYLKARIVHPDKNPGDPKAAKNFQVLGEAYQVLSDPEKREAYDKHGKEGI 454
            YYD+LGV+ DAS  EIKKAY  KA   HPD+NP DP+A + F+   EAY+VLSDPEKR+ YD+ G +G+
Sbjct:    5 YYDILGVDEDASDKEIKKAYRKKAMEYHPDRNPDDPEAEQKFKEASEAYEVLSDPEKRQRYDQFGHDGV 73          
The following BLAST results are available for this feature:
BLAST of GO241680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJ10_ARATH6.621e-5261.24Chaperone protein dnaJ 10 OS=Arabidopsis thaliana ... [more]
CAJ1_YEAST8.708e-2838.14Protein CAJ1 OS=Saccharomyces cerevisiae GN=CAJ1 P... [more]
DJP1_YEAST2.801e-2650.00DnaJ-like protein 1 OS=Saccharomyces cerevisiae GN... [more]
YHXB_SCHPO1.439e-2236.09Uncharacterized J domain-containing protein C3E7.1... [more]
YAY1_SCHPO1.140e-1938.41Uncharacterized J domain-containing protein C4H3.0... [more]
DNAJ_CHLAB1.944e-1947.41Chaperone protein dnaJ OS=Chlamydophila abortus GN... [more]
DNAJ_CHLFF9.650e-1947.41Chaperone protein dnaJ OS=Chlamydophila felis (str... [more]
DNAJ_CHLCV9.650e-1947.01Chaperone protein dnaJ OS=Chlamydophila caviae GN=... [more]
MAS5_YEAST8.169e-1837.32Mitochondrial protein import protein MAS5 OS=Sacch... [more]
DNAJ_SALRD1.067e-1759.42Chaperone protein dnaJ OS=Salinibacter ruber (stra... [more]

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Properties
Property NameValue
Genbank description328 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 457 5, mRNA sequence.