GO241631

Overview
NameGO241631
Unique NameGO241631
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6849 contig Csv1_Contig6849:253..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 4.257e-50
Identity = 93/132 (70.45%), Postives = 109/132 (82.58%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSL+PS FGGRRTNVFDPFSLDVWDPF+GFL+  LTNAP  A++ + F NA++DW+ETP+AHVFKAD+PGL+          G ILQISGERS E EEK+D WHRVERSSGKF+R FRLP+NAKVE+VKASM
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASM 130          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.707e-49
Identity = 95/134 (70.90%), Postives = 111/134 (82.84%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFL--SSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPSIFGGRR+NVFDPFS D+WDPF+GF   SSAL NA S+AR+ + F NAR+DWKETP+AHVFKADLPGL+            +LQISGERSKE EEKNDKWHRVER+SGKF+R FRLP+NAK+E+VKA+M
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATM 133          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 6.147e-49
Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLS-SALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPSIFGGRRTNVFDPFSLDV+DPF+GFL+ S L NAP  A + + F NA++DW+ETP+AHVFKADLPGLR          G ILQISGERS E EEKNDKWHRVERSSGKF R FRLP+NAK+E++KASM
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASM 131          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.405e-47
Identity = 90/132 (68.18%), Postives = 105/132 (79.55%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MS+IPS FGGRR+NVFDPFSLDVWDPF  F     ++A    +ET+ F N  IDWKETPQAHVFKADLPGL+          G++LQISGER+KE+EEKNDKWHRVERSSGKFLR FRLP+NAKV++VKA+M
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAM 131          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.385e-45
Identity = 90/137 (65.69%), Postives = 105/137 (76.64%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGF-----LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIP+ FGGRR NVFDPFSLDVWDPF  F     LSSA  + P  +RE S F + R+DWKETP+AHVFKAD+PGL+           ++LQISGER+ E+E+KND WHRVERSSGKF+R FRLP+NAKVEQVKASM
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSA--SFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASM 135          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.185e-45
Identity = 85/132 (64.39%), Postives = 103/132 (78.03%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPS FGGRR+NVFDPFSLDVWDPF  F  +    + S  RE S F + R+DWKETP+AHVFKADLPG++           R+LQISGERS E+E+KND+WHR+ERSSGKF+R FRLP+NAK++QVKA+M
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAM 132          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.559e-44
Identity = 88/133 (66.17%), Postives = 103/133 (77.44%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPSIFGGRR+NVFDPFSLDVWDPF  F      + P+S + E S F N R+DWKETP+AHVF+AD+PGL+           R+LQISGER+ E+E+KND WHRVERSSG F+R FRLP+NAKVEQVKASM
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDF------HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASM 127          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP11_PEA (18.1 kDa class I heat shock protein OS=Pisum sativum GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.559e-44
Identity = 86/132 (65.15%), Postives = 101/132 (76.52%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPS F GRR+NVFDPFSLDVWDP   F  S  + + S  RE   F + R+DWKETP+AHVFKADLPGL+           R+LQISGERS E+E+KND+WHRVERSSGKFLR FRLP+NAK+++VKASM
Sbjct:    1 MSLIPSFFSGRRSNVFDPFSLDVWDPLKDFPFSNSSPSASFPRENPAFVSTRVDWKETPEAHVFKADLPGLKKEEVKVEVEDDRVLQISGERSVEKEDKNDEWHRVERSSGKFLRRFRLPENAKMDKVKASM 132          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.859e-43
Identity = 87/133 (65.41%), Postives = 102/133 (76.69%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MSLIPS FGGRR++VFDPFSLDVWDPF  F        PSS + E S F + R+DWKETP+AHVFKAD+PGL+          GR+LQISGER+ E+E+KND WHRVERSSGK +R FRLP+NAKV+QVKASM
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDF------PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASM 127          
BLAST of GO241631 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.040e-43
Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRGFRLPDNAKVEQVKASM 467
            MS+IPS F  +R+N+FDPFSLD WDPF G +S+        ARET+   NARIDWKETP+AHV KADLPG++          GR+LQISGER +EQEEK+D WHRVERSSGKF+R FRLP+NAK+++VKA M
Sbjct:    1 MSIIPSFFTSKRSNIFDPFSLDTWDPFQGIIST------EPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEEKDDTWHRVERSSGKFIRRFRLPENAKMDEVKAMM 126          
The following BLAST results are available for this feature:
BLAST of GO241631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
HSP17_ARATH4.257e-5070.4517.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS181_ARATH4.707e-4970.9018.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH6.147e-4972.1817.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_DAUCA4.405e-4768.1817.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP16_SOYBN5.385e-4565.6918.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA9.185e-4564.3918.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP13_SOYBN4.559e-4466.1717.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_PEA4.559e-4465.1518.1 kDa class I heat shock protein OS=Pisum sativ... [more]
HSP11_SOYBN3.859e-4365.4117.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_HELAN5.040e-4362.1217.6 kDa class I heat shock protein OS=Helianthus ... [more]

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Properties
Property NameValue
Genbank description279 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 401 5, mRNA sequence.