GO241627

Overview
NameGO241627
Unique NameGO241627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13747 contig Csv1_Contig13747:1..609. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241627 vs. ExPASy Swiss-Prot
Match: DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 2.522e-31
Identity = 67/140 (47.86%), Postives = 86/140 (61.43%), Query Frame = 3 
Query:  141 AAAPASRGPIEANDKDLIQVALNXXXXXXXXXXNGALGRGLDSIEPEMAAGGPPPTGASKANLDHTTYRIIEEFGYQEIGHLRAIVTTVGGFARPQIDLSRQNFANIFDQAVGYKLTPPFDPYSNTVNYLLASYVIPYVG 560
            AA    +  I  +D  L++  LN            A G+G+D +EPE+A GGP P G  KANL      II +F YQE GH+RAI ++V GF RP +DLS ++FA + D A G  L PPFDPY+N +NYLLA YV+PYVG
Sbjct:   26 AAWHHEKDDIPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVG 165
The following BLAST results are available for this feature:
BLAST of GO241627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRPE_CRAPL2.522e-3147.86Desiccation-related protein PCC13-62 OS=Craterosti... [more]
back to top
Properties
Property NameValue
Genbank description275 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 397 5, mRNA sequence.