GO241621

Overview
NameGO241621
Unique NameGO241621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 7.257e-71
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI  GMDF
Sbjct:    1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI-YGMDF 129          

HSP 2 Score: 38.1206 bits (87), Expect = 7.257e-71
Identity = 22/45 (48.89%), Postives = 23/45 (51.11%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG             VGI  RVTK+DAMKWFQVK
Sbjct:  125 YGMDFFVVLERPGYRVGRRR-RCKARVGIQHRVTKDDAMKWFQVK 168          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.033e-69
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI  GMDF
Sbjct:    1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI-YGMDF 129          

HSP 2 Score: 38.1206 bits (87), Expect = 1.033e-69
Identity = 22/45 (48.89%), Postives = 23/45 (51.11%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG             VGI  RVTK+DAMKWFQVK
Sbjct:  125 YGMDFYVVLERPGYRVARRR-RCKTRVGIQHRVTKDDAMKWFQVK 168          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1 SV=2)

HSP 1 Score: 245.358 bits (625), Expect = 1.033e-69
Identity = 125/130 (96.15%), Postives = 128/130 (98.46%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI  GMDF
Sbjct:    1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI-YGMDF 129          

HSP 2 Score: 38.1206 bits (87), Expect = 1.033e-69
Identity = 22/45 (48.89%), Postives = 23/45 (51.11%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG             VGI  RVTK+DAMKWFQVK
Sbjct:  125 YGMDFYVVLERPGYRVARRR-RCKARVGIQHRVTKDDAMKWFQVK 168          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 1.916e-68
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            MASEKK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGI  GMDF
Sbjct:    1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGI-YGMDF 129          

HSP 2 Score: 38.1206 bits (87), Expect = 1.916e-68
Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  541 VGIXXRVTKEDAMKWFQVK 597
            VGI  RVTKEDAMKWFQVK
Sbjct:  150 VGIQHRVTKEDAMKWFQVK 168          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2)

HSP 1 Score: 241.121 bits (614), Expect = 1.916e-68
Identity = 123/130 (94.62%), Postives = 127/130 (97.69%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            MASEKK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGI  GMDF
Sbjct:    1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGI-YGMDF 129          

HSP 2 Score: 38.1206 bits (87), Expect = 1.916e-68
Identity = 17/19 (89.47%), Postives = 17/19 (89.47%), Query Frame = 1
Query:  541 VGIXXRVTKEDAMKWFQVK 597
            VGI  RVTKEDAMKWFQVK
Sbjct:  150 VGIQHRVTKEDAMKWFQVK 168          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_NEUCR (60S ribosomal protein L11 OS=Neurospora crassa GN=rpl-11 PE=3 SV=2)

HSP 1 Score: 203.756 bits (517), Expect = 1.292e-54
Identity = 102/130 (78.46%), Postives = 116/130 (89.23%), Query Frame = 2
Query:   83 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            M++E+K  NPMRE+++QKLVLNI VGESGDRLTRAAKVLEQLSGQTPV+SKARYTVR+FGIRRNEKI+ +VTVRG KA ++LE GLKVKEYEL +RNFS+TG FGFGI EHIDLGIKYDP  GI  GMDF
Sbjct:    1 MSTEQKAQNPMRELRIQKLVLNICVGESGDRLTRAAKVLEQLSGQTPVYSKARYTVRTFGIRRNEKISVHVTVRGPKAEEILERGLKVKEYELRKRNFSETGNFGFGISEHIDLGIKYDPGIGI-YGMDF 129          

HSP 2 Score: 29.261 bits (64), Expect = 1.292e-54
Identity = 16/43 (37.21%), Postives = 21/43 (48.84%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQ 591
            YG  F     RPG    S    A   VG   R+T++D +KWF+
Sbjct:  125 YGMDFYCCMTRPGERV-SRRRRAKSRVGATHRITRDDTVKWFK 166          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_RAT (60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 1.527e-52
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 2
Query:  107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GI  G+DF
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGI-YGLDF 130          

HSP 2 Score: 31.187 bits (69), Expect = 1.527e-52
Identity = 16/45 (35.56%), Postives = 22/45 (48.89%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG          +  +G   R++KE+AM+WFQ K
Sbjct:  126 YGLDFYVVLGRPGFSIADKK-RRTGCIGAKHRISKEEAMRWFQQK 169          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_PONAB (60S ribosomal protein L11 OS=Pongo abelii GN=RPL11 PE=2 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 1.527e-52
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 2
Query:  107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GI  G+DF
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGI-YGLDF 130          

HSP 2 Score: 31.187 bits (69), Expect = 1.527e-52
Identity = 16/45 (35.56%), Postives = 22/45 (48.89%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG          +  +G   R++KE+AM+WFQ K
Sbjct:  126 YGLDFYVVLGRPGFSITDKK-RRTGCIGAKHRISKEEAMRWFQQK 169          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_PIG (60S ribosomal protein L11 OS=Sus scrofa GN=RPL11 PE=2 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 1.527e-52
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 2
Query:  107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GI  G+DF
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGI-YGLDF 130          

HSP 2 Score: 31.187 bits (69), Expect = 1.527e-52
Identity = 16/45 (35.56%), Postives = 22/45 (48.89%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG          +  +G   R++KE+AM+WFQ K
Sbjct:  126 YGLDFYVVLGRPGFSIADKK-RRTGCIGAKHRISKEEAMRWFQQK 169          
BLAST of GO241621 vs. ExPASy Swiss-Prot
Match: RL11_MOUSE (60S ribosomal protein L11 OS=Mus musculus GN=Rpl11 PE=1 SV=4)

HSP 1 Score: 194.897 bits (494), Expect = 1.527e-52
Identity = 98/122 (80.33%), Postives = 109/122 (89.34%), Query Frame = 2
Query:  107 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGI*XGMDF 472
            NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GI  G+DF
Sbjct:   10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGI-YGLDF 130          

HSP 2 Score: 31.187 bits (69), Expect = 1.527e-52
Identity = 16/45 (35.56%), Postives = 22/45 (48.89%), Query Frame = 1
Query:  463 YGFSFCGFWXRPGXPCXSPXVGASXXVGIXXRVTKEDAMKWFQVK 597
            YG  F     RPG          +  +G   R++KE+AM+WFQ K
Sbjct:  126 YGLDFYVVLGRPGFSIADKK-RRTGCIGAKHRISKEEAMRWFQQK 169          
The following BLAST results are available for this feature:
BLAST of GO241621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
RL11_MEDSA7.257e-7198.4660S ribosomal protein L11 OS=Medicago sativa GN=RP... [more]
RL112_ARATH1.033e-6996.1560S ribosomal protein L11-2 OS=Arabidopsis thalian... [more]
RL111_ARATH1.033e-6996.1560S ribosomal protein L11-1 OS=Arabidopsis thalian... [more]
RL11_ORYSJ1.916e-6894.6260S ribosomal protein L11 OS=Oryza sativa subsp. j... [more]
RL11_ORYSI1.916e-6894.6260S ribosomal protein L11 OS=Oryza sativa subsp. i... [more]
RL11_NEUCR1.292e-5478.4660S ribosomal protein L11 OS=Neurospora crassa GN=... [more]
RL11_RAT1.527e-5280.3360S ribosomal protein L11 OS=Rattus norvegicus GN=... [more]
RL11_PONAB1.527e-5280.3360S ribosomal protein L11 OS=Pongo abelii GN=RPL11... [more]
RL11_PIG1.527e-5280.3360S ribosomal protein L11 OS=Sus scrofa GN=RPL11 P... [more]
RL11_MOUSE1.527e-5280.3360S ribosomal protein L11 OS=Mus musculus GN=Rpl11... [more]

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Properties
Property NameValue
Genbank description269 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 391 5, mRNA sequence.