GO241618

Overview
NameGO241618
Unique NameGO241618
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2662 contig Csv1_Contig2662:488..1103. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_ARATH (GTP-binding protein SAR1A OS=Arabidopsis thaliana GN=SAR1A PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.953e-67
Identity = 76/99 (76.77%), Postives = 85/99 (85.86%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTNF 568
            P   +LSIGKIKFKAFDLGGHQIARRVWKDYYA++DAVVYLVDAYDKERFAESK+ELDALLSDESLA+VPF   G +  I +    +DELRYHLGL+NF
Sbjct:   54 PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLASVPFLILGNKIDIPYAA-SEDELRYHLGLSNF 151          

HSP 2 Score: 120.553 bits (301), Expect = 5.953e-67
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MF+ DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE
Sbjct:    1 MFMIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 58          

HSP 3 Score: 25.7942 bits (55), Expect = 5.953e-67
Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 3
Query:  582 GKXNLXDSNVRPL 620
            GK NL DSNVRPL
Sbjct:  156 GKVNLTDSNVRPL 168          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.039e-67
Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTNF 568
            P   +LSIGKIKFKAFDLGGHQIARRVWKDYYA++DAVVYLVDAYDKERFAESKRELDALLSDE+LA VPF   G +  I +    +DELRYHLGLTNF
Sbjct:   54 PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAA-SEDELRYHLGLTNF 151          

HSP 2 Score: 124.02 bits (310), Expect = 6.039e-67
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1B_BRACM (GTP-binding protein SAR1B OS=Brassica campestris GN=SAR1B PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 3.872e-66
Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTNF 568
            P   +LSIGKIKFKAFDLGGHQIARRVWKDYYA++DAVVYLVDAYDKERF+ESK+ELDALLSD++LA VPF   G  K+ +     +DELRYHLGLTNF
Sbjct:   54 PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDALATVPFLILG-NKIDNPYAASEDELRYHLGLTNF 151          

HSP 2 Score: 124.02 bits (310), Expect = 3.872e-66
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.399e-65
Identity = 76/99 (76.77%), Postives = 84/99 (84.85%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTNF 568
            P   +LSIGKIKFKAFDLGGHQIARRVWKDYYA++DAVVYLVDAYDKERFAESK+ELDALLSDESLA VPF   G +  I +    +DELRYHLGL+NF
Sbjct:   54 PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAA-SEDELRYHLGLSNF 151          

HSP 2 Score: 120.168 bits (300), Expect = 2.399e-65
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MF+ DWFYG+LASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE
Sbjct:    1 MFVIDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 58          

HSP 3 Score: 21.1718 bits (43), Expect = 2.399e-65
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  582 GKXNLXDSNVRPL 620
            GK +L  SNVRPL
Sbjct:  156 GKVDLVGSNVRPL 168          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 3.814e-60
Identity = 68/97 (70.10%), Postives = 78/97 (80.41%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            P   +LSIG IKFKAFDLGGHQIARRVW+DYYA++DAVVYLVDA D+ERF E+K+ELD LLSDESL NVPF   G +  I +    +DELRYHLGLT
Sbjct:   54 PTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAA-SEDELRYHLGLT 149          

HSP 2 Score: 117.472 bits (293), Expect = 3.814e-60
Identity = 54/58 (93.10%), Postives = 57/58 (98.28%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MFL DWFYG+LASLGLWQK+AKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEE
Sbjct:    1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.331e-54
Identity = 55/58 (94.83%), Postives = 57/58 (98.28%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MFL DWFYGILA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQ+PTSEE
Sbjct:    1 MFLVDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEE 58          

HSP 2 Score: 112.849 bits (281), Expect = 6.331e-54
Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSD-ESLANVPFPNFGQQKLISHML--HXKDELRYHLG 556
            P   +LSIGKIKFKAFDLGGHQIARRVWKDYYA++DAVVYLVD++DKERFAESK+ELDALLS   SLA+           I H +    K   RYH+G
Sbjct:   54 PTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLSGWSSLAHCFLFLDNWVTRIEHPICCLRKMNWRYHMG 151          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.199e-42
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLT 562
            P   +L++G I+FKAFDLGGH+ ARR+WKDYY  +DA+VYL+D+  ++RF ESK+ELD+LLS + LANVPF   G +  I +    +++ R  LGLT
Sbjct:   54 PTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNT--SEEKFRASLGLT 148          

HSP 2 Score: 88.1965 bits (217), Expect = 1.199e-42
Identity = 42/58 (72.41%), Postives = 48/58 (82.76%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MFLFDWF+ +L+ LGL+ K AKILFLGLDNAGKTTLL +LKD RL  + PT HPTSEE
Sbjct:    1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSSYLPTFHPTSEE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_DEBHA (Small COPII coat GTPase SAR1 OS=Debaryomyces hansenii GN=SAR1 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.036e-42
Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            M+LFDWF  +LASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    1 MWLFDWFQDVLASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEE 58          

HSP 2 Score: 94.7449 bits (234), Expect = 2.036e-42
Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG ++F  FDLGGHQ ARR+WKDY+  ++ +V+LVDA D ERFAESK EL++L   E LA+VPF   G  K+ +     + EL+  LGL N
Sbjct:   54 PTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADPERFAESKAELESLFKIEELASVPFLILG-NKIDASSAVGEMELKSALGLYN 150          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 4.504e-42
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGL 559
            P   +L+IG +KF  +DLGGH  ARR+W+DY+  +D +V+LVD+ D ERFAESK ELD+LLS ESLA VPF   G  K+ ++    +++LR+ LGL
Sbjct:   54 PTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILG-NKIDAYGAVSEEQLRHELGL 148          

HSP 2 Score: 90.8929 bits (224), Expect = 4.504e-42
Identity = 42/58 (72.41%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            MF+ +WF+ +LASLGL  K AK+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    1 MFIINWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEE 58          
BLAST of GO241618 vs. ExPASy Swiss-Prot
Match: SAR1_LODEL (Small COPII coat GTPase SAR1 OS=Lodderomyces elongisporus GN=SAR1 PE=3 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.299e-41
Identity = 45/58 (77.59%), Postives = 50/58 (86.21%), Query Frame = 1
Query:  112 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQHPTSEE 285
            M++FDWF  ILASLGLW K AK+LFLGLDNAGKTTLLHMLK++RL   QPT HPTSEE
Sbjct:    1 MWIFDWFQDILASLGLWNKHAKLLFLGLDNAGKTTLLHMLKNDRLATLQPTLHPTSEE 58          

HSP 2 Score: 92.4337 bits (228), Expect = 1.299e-41
Identity = 48/98 (48.98%), Postives = 64/98 (65.31%), Query Frame = 2
Query:  272 PLRRKLSIGKIKFKAFDLGGHQIARRVWKDYYARLDAVVYLVDAYDKERFAESKRELDALLSDESLANVPFPNFGQQKLISHMLHXKDELRYHLGLTN 565
            P   +L+IG ++F  FDLGGHQ ARR+WKDY+  ++ +V+LVDA D ERFAESK EL++L   E L+ VPF   G  K+       + EL+  LGL N
Sbjct:   54 PTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADSERFAESKAELESLFKIEELSQVPFVILG-NKIDVPTAVGEMELKNALGLYN 150          
The following BLAST results are available for this feature:
BLAST of GO241618 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
SAR1A_ARATH5.953e-6776.77GTP-binding protein SAR1A OS=Arabidopsis thaliana ... [more]
SAR1B_ARATH6.039e-6777.78GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
SAR1B_BRACM3.872e-6674.75GTP-binding protein SAR1B OS=Brassica campestris G... [more]
SAR1A_BRACM2.399e-6576.77GTP-binding protein SAR1A OS=Brassica campestris G... [more]
SAR2_SOLLC3.814e-6070.10GTP-binding protein SAR2 OS=Solanum lycopersicum G... [more]
SAR1_TOBAC6.331e-5494.83GTP-binding protein SAR1 OS=Nicotiana tabacum GN=S... [more]
SAR1A_DICDI1.199e-4252.58GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
SAR1_DEBHA2.036e-4277.59Small COPII coat GTPase SAR1 OS=Debaryomyces hanse... [more]
SAR1_CRYNE4.504e-4252.08Small COPII coat GTPase SAR1 OS=Cryptococcus neofo... [more]
SAR1_LODEL1.299e-4177.59Small COPII coat GTPase SAR1 OS=Lodderomyces elong... [more]

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Properties
Property NameValue
Genbank description266 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 388 5, mRNA sequence.