GO241615

Overview
NameGO241615
Unique NameGO241615
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6220 contig Csv1_Contig6220:109..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_SOYBN (Phosphomannomutase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 324.709 bits (831), Expect = 2.146e-88
Identity = 160/178 (89.89%), Postives = 170/178 (95.51%), Query Frame = 1
Query:   61 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAAR+ GL+ALFDVDGTLTAPRK  TP+ML FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHK+GKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQ
Sbjct:    1 MAARRPGLIALFDVDGTLTAPRKVVTPEMLTFMQELRKVVTVGVVGGSDLIKISEQLGSTVTNDYDYVFSENGLVAHKEGKLIGTQSLKSFLGEEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQ 178          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_TOBAC (Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 2.008e-86
Identity = 158/178 (88.76%), Postives = 167/178 (93.82%), Query Frame = 1
Query:   61 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAARK GL+ALFDVDGTLTAPRK  TP+ML+FM+ELRKVVTVGVVGGSDL KISEQLGKTV  +YDY FSENGLVAHKDGKLIGTQSLKSFLG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGR+CSQEERDEFE+YDK+H IR  MVSVLREKFAHLNLTFSIGGQ
Sbjct:    1 MAARKPGLIALFDVDGTLTAPRKEVTPEMLKFMKELRKVVTVGVVGGSDLVKISEQLGKTVTTDYDYCFSENGLVAHKDGKLIGTQSLKSFLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRDCSQEERDEFEKYDKVHKIRQTMVSVLREKFAHLNLTFSIGGQ 178          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_SOLLC (Phosphomannomutase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.102e-84
Identity = 156/178 (87.64%), Postives = 165/178 (92.70%), Query Frame = 1
Query:   61 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAARK GL+ALFDVDGTLTAPRK +TPQML+FM+ELRKVVTVGVVGGSDL KISEQLG TV ++YDYVFSENGLVAHKDGKLIG QSLKS LG EKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+  IR  MVSVLREKFAH NLTFSIGGQ
Sbjct:    1 MAARKAGLIALFDVDGTLTAPRKESTPQMLKFMQELRKVVTVGVVGGSDLVKISEQLGNTVTNDYDYVFSENGLVAHKDGKLIGKQSLKSHLGDEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQKIRETMVSVLREKFAHFNLTFSIGGQ 178          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_WHEAT (Phosphomannomutase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 1.880e-84
Identity = 153/178 (85.96%), Postives = 169/178 (94.94%), Query Frame = 1
Query:   64 AARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            AARK  G+LALFDVDGTLTAPRK  TP+MLEFM+ LR+ VTVGVVGGSDL KISEQLGK+VI +YDYVFSENGLVAHKDGKLIGTQSLK++LG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGM+N+SPIGRNCSQEERD+FE+YDK+HN+RPKMVSVLREKFAHLNLTFSIGGQ
Sbjct:    3 AARKDAGVLALFDVDGTLTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQ 180          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_ORYSJ (Phosphomannomutase OS=Oryza sativa subsp. japonica GN=PMM PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 3.207e-84
Identity = 154/179 (86.03%), Postives = 169/179 (94.41%), Query Frame = 1
Query:   61 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQ
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQ 179          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_ORYSI (Phosphomannomutase OS=Oryza sativa subsp. indica GN=PMM PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 3.207e-84
Identity = 154/179 (86.03%), Postives = 169/179 (94.41%), Query Frame = 1
Query:   61 MAARKQ-GLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAARK  G+LALFDVDGTLTAPRK  TP+ML+FM++LR+ VTVGVVGGSDL KISEQLGK+V  +YDY FSENGLVAHK+G+LIGTQSLKSFLG ++LKEFINFTLHYIADLDIPIKRGTFIEFRSGMLN+SPIGRNCSQEERDEFE+YDK+HNIRPKMVSVLREKFAHLNLTFSIGGQ
Sbjct:    1 MAARKNAGVLALFDVDGTLTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQ 179          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_ARATH (Phosphomannomutase OS=Arabidopsis thaliana GN=PMM PE=1 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.298e-82
Identity = 149/178 (83.71%), Postives = 165/178 (92.70%), Query Frame = 1
Query:   61 MAARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            MAA+  G++ALFDVDGTLTAPRK ATP++L+F+RELRKVVT+GVVGGSDLSKISEQLGKTV ++YDY FSENGLVAHKDGK IG QSLK  LG +KLKE INFTLHYIADLDIPIKRGTFIEFR+GMLN+SPIGRNCSQEERDEFERYDK+ NIRPKMV+ LRE+FAHLNLTFSIGGQ
Sbjct:    1 MAAKIPGVIALFDVDGTLTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKTVTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQ 178          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM1_DICDI (Phosphomannomutase 1 OS=Dictyostelium discoideum GN=pmmA PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 9.079e-63
Identity = 112/170 (65.88%), Postives = 139/170 (81.76%), Query Frame = 1
Query:   85 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            + LFDVDGTLT PR   TP+M +F+  LR  V +GVVGGSD++KI EQLG+  I+E+ Y+F+ENGL++ KDG L+ TQ +K FLG E +K+FINF LHYIADLDIPIKRGTF+EFR+GM+NISPIGRNCSQ+ER+EFE+YD  H IRP MVS+L+EKF  L L +SIGGQ
Sbjct:    8 ICLFDVDGTLTKPRNVITPEMKDFLAGLRTKVELGVVGGSDINKIKEQLGENCINEFHYLFAENGLLSFKDGSLLATQDIKKFLGEENIKKFINFVLHYIADLDIPIKRGTFVEFRNGMINISPIGRNCSQQEREEFEKYDLEHKIRPTMVSILKEKFQSLGLQYSIGGQ 177          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM2_DICDI (Phosphomannomutase 2 OS=Dictyostelium discoideum GN=pmmB PE=3 SV=2)

HSP 1 Score: 228.794 bits (582), Expect = 1.603e-59
Identity = 106/176 (60.23%), Postives = 138/176 (78.41%), Query Frame = 1
Query:   67 ARKQGLLALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            ++ +  + LFDVD TLT PR A T +M E +  LR  + +GVVGGS+ +KI EQLG+  I+++DYVF+ENGL+A+KDG L+  Q +K +LG E +K+FINF LHY+ADLDIPIKRGTF+EFR+GMLNISPIGRNCSQ+ER+EFE+YD  H IR  MVS+L+E+F    L +SIGGQ
Sbjct:    2 SQNKNTICLFDVDDTLTKPRNAITNEMKELLASLRTKIKIGVVGGSNFNKIKEQLGENFINDFDYVFAENGLIAYKDGSLLEIQDIKKYLGEENIKKFINFVLHYVADLDIPIKRGTFVEFRNGMLNISPIGRNCSQQEREEFEKYDLEHKIRSTMVSILKEEFKSFGLQYSIGGQ 177          
BLAST of GO241615 vs. ExPASy Swiss-Prot
Match: PMM_SCHPO (Phosphomannomutase OS=Schizosaccharomyces pombe GN=pmm1 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 8.230e-56
Identity = 108/173 (62.43%), Postives = 134/173 (77.46%), Query Frame = 1
Query:   85 LALFDVDGTLTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQL---GKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQ 594
            L LFDVDGTLT  R + +P+MLE ++ LRKVV +G VGGSDLSK  EQL   G+ VID +DY F+ENGL A++ G+ + +QS  ++LG EK ++ +NF LHYIADLDIP+KRGTFIEFR+GM+NISP+GRN + EER+EFER+DK   IR  MV VLREKF    LTFSIGGQ
Sbjct:   15 LVLFDVDGTLTPARLSVSPEMLETLQNLRKVVAIGFVGGSDLSKQQEQLSVNGENVIDSFDYAFAENGLTAYRYGQQLASQSFIAWLGEEKYQKLVNFCLHYIADLDIPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFKDYGLTFSIGGQ 187          
The following BLAST results are available for this feature:
BLAST of GO241615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_SOYBN2.146e-8889.89Phosphomannomutase OS=Glycine max PE=2 SV=1[more]
PMM_TOBAC2.008e-8688.76Phosphomannomutase OS=Nicotiana tabacum PE=2 SV=1[more]
PMM_SOLLC1.102e-8487.64Phosphomannomutase OS=Solanum lycopersicum PE=2 SV... [more]
PMM_WHEAT1.880e-8485.96Phosphomannomutase OS=Triticum aestivum PE=2 SV=1[more]
PMM_ORYSJ3.207e-8486.03Phosphomannomutase OS=Oryza sativa subsp. japonica... [more]
PMM_ORYSI3.207e-8486.03Phosphomannomutase OS=Oryza sativa subsp. indica G... [more]
PMM_ARATH2.298e-8283.71Phosphomannomutase OS=Arabidopsis thaliana GN=PMM ... [more]
PMM1_DICDI9.079e-6365.88Phosphomannomutase 1 OS=Dictyostelium discoideum G... [more]
PMM2_DICDI1.603e-5960.23Phosphomannomutase 2 OS=Dictyostelium discoideum G... [more]
PMM_SCHPO8.230e-5662.43Phosphomannomutase OS=Schizosaccharomyces pombe GN... [more]

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Properties
Property NameValue
Genbank description263 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 385 5, mRNA sequence.