GO241611

Overview
NameGO241611
Unique NameGO241611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10655 contig Csv1_Contig10655:20..635. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_MALDO (Peptidyl-prolyl cis-trans isomerase 1 OS=Malus domestica GN=PIN1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.488e-46
Identity = 85/104 (81.73%), Postives = 99/104 (95.19%), Query Frame = 3
Query:  147 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            NQVRASHILIKHQGSRRKASWKDPEG++I NTTR+SAVSQL+A+RDDI+SGKAKFD++A+R SDCSSAKRGGDLG FGR QMQKPFEEAT+ LK+GE+S++VDT
Sbjct:    7 NQVRASHILIKHQGSRRKASWKDPEGQIIRNTTRDSAVSQLKALRDDILSGKAKFDDLAARYSDCSSAKRGGDLGPFGRNQMQKPFEEATFALKVGEMSDIVDT 110          

HSP 2 Score: 23.483 bits (49), Expect = 7.488e-46
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  460 DSGVHLIMRTG 492
            DSGVH+I RTG
Sbjct:  111 DSGVHIIKRTG 121          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_ARATH (Peptidyl-prolyl cis-trans isomerase 1 OS=Arabidopsis thaliana GN=PIN1 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.057e-44
Identity = 83/104 (79.81%), Postives = 99/104 (95.19%), Query Frame = 3
Query:  147 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +QV+ASHILIKHQGSRRKASWKDPEG++I  TTRE+AV QL++IR+DIVSGKA F+EVA+R+SDCSSAKRGGDLG+FGRGQMQKPFEEATY LK+G+IS++VDT
Sbjct:    5 DQVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATRVSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDT 108          

HSP 2 Score: 21.1718 bits (43), Expect = 3.057e-44
Identity = 8/10 (80.00%), Postives = 9/10 (90.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSGVH+I RT
Sbjct:  109 DSGVHIIKRT 118          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_DIGLA (Peptidyl-prolyl cis-trans isomerase 1 OS=Digitalis lanata GN=PARV12.8 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.500e-39
Identity = 75/105 (71.43%), Postives = 92/105 (87.62%), Query Frame = 3
Query:  144 ANQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            + +VRASHILIKHQGSRRK+SWKDP+G +IS TTR+ AVSQLQ++R +++S  A F ++ASR S CSSAKRGGDLG FGRGQMQKPFEEAT+ LK+GEIS++VDT
Sbjct:    3 SEKVRASHILIKHQGSRRKSSWKDPDGSLISATTRDDAVSQLQSLRQELLSDPASFSDLASRHSHCSSAKRGGDLGPFGRGQMQKPFEEATFALKVGEISDIVDT 107          

HSP 2 Score: 23.483 bits (49), Expect = 3.500e-39
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  460 DSGVHLIMRTG 492
            DSGVH+I RTG
Sbjct:  108 DSGVHIIKRTG 118          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: DOD_DROME (Protein dodo OS=Drosophila melanogaster GN=dod PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 8.277e-22
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 3
Query:  147 NQVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            ++V   H+L+KH+GSRR +SW++         T+E A   L+  R+ IV  +A FDE+A   SDCSSAKRGGDLG FGRGQMQ  FE+A + L + ++S +VD+
Sbjct:   56 DEVHCLHLLVKHKGSRRPSSWREAN----ITRTKEEAQLLLEVYRNKIVQQEATFDELARSYSDCSSAKRGGDLGKFGRGQMQAAFEDAAFKLNVNQLSGIVDS 155          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_RHIOR (Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizopus oryzae GN=pin1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 7.614e-21
Identity = 51/103 (49.51%), Postives = 70/103 (67.96%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +VRASH+LIK + SRR +SW++         ++E A+  L   +  I SG+     +A+  SDC+SAKRGGDLG F RGQMQKPFEEAT+ L++GE+S+ V T
Sbjct:   41 RVRASHLLIKSRESRRPSSWREEH----ITRSKEEALKILTDFQHKIESGQETLSALATNYSDCTSAKRGGDLGYFERGQMQKPFEEATFALQVGELSKPVWT 139          

HSP 2 Score: 23.0978 bits (48), Expect = 7.614e-21
Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSGVHLI+RT
Sbjct:  140 DSGVHLILRT 149          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_MACFA (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Macaca fascicularis GN=PIN1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.785e-20
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +VR SH+L+KH  SRR +SW+  +       T+E A+  +      I SG+  F+ +AS+ SDCSSAK  GDLG F RGQMQKPFE+A++ L+ GE+S  V T
Sbjct:   54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152          

HSP 2 Score: 21.9422 bits (45), Expect = 4.785e-20
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSG+H+I+RT
Sbjct:  153 DSGIHIILRT 162          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_HUMAN (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Homo sapiens GN=PIN1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.785e-20
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +VR SH+L+KH  SRR +SW+  +       T+E A+  +      I SG+  F+ +AS+ SDCSSAK  GDLG F RGQMQKPFE+A++ L+ GE+S  V T
Sbjct:   54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152          

HSP 2 Score: 21.9422 bits (45), Expect = 4.785e-20
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSG+H+I+RT
Sbjct:  153 DSGIHIILRT 162          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_BOVIN (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Bos taurus GN=PIN1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.785e-20
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +VR SH+L+KH  SRR +SW+  +       T+E A+  +      I SG+  F+ +AS+ SDCSSAK  GDLG F RGQMQKPFE+A++ L+ GE+S  V T
Sbjct:   54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152          

HSP 2 Score: 21.9422 bits (45), Expect = 4.785e-20
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSG+H+I+RT
Sbjct:  153 DSGIHIILRT 162          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: SSP1_NEUCR (Peptidyl-prolyl cis-trans isomerase ssp-1 OS=Neurospora crassa GN=ssp-1 PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 5.932e-20
Identity = 49/103 (47.57%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            ++R +H+L+KH  SRR +SW++ E       T++ A++ LQ     I SG     E+A   SDCSSA++ GDLG FGRG MQK FE+A + LK GEIS +VDT
Sbjct:   73 KIRCAHLLVKHNQSRRPSSWRESE----ITRTKQEALTTLQGFEQRIKSGSISLGELALTESDCSSARKRGDLGYFGRGDMQKEFEDAAFALKPGEISGIVDT 171          
BLAST of GO241611 vs. ExPASy Swiss-Prot
Match: PIN1_MOUSE (Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 OS=Mus musculus GN=Pin1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.369e-19
Identity = 48/103 (46.60%), Postives = 67/103 (65.05%), Query Frame = 3
Query:  150 QVRASHILIKHQGSRRKASWKDPEGRVISNTTRESAVSQLQAIRDDIVSGKAKFDEVASRLSDCSSAKRGGDLGNFGRGQMQKPFEEATYNLKIGEISEVVDT 458
            +VR SH+L+KH  SRR +SW+  +       ++E A+  +      I SG+  F+ +AS+ SDCSSAK  GDLG F RGQMQKPFE+A++ L+ GE+S  V T
Sbjct:   56 KVRCSHLLVKHSQSRRPSSWRQEK----ITRSKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGPFSRGQMQKPFEDASFALRTGEMSGPVFT 154          

HSP 2 Score: 21.9422 bits (45), Expect = 1.369e-19
Identity = 7/10 (70.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:  460 DSGVHLIMRT 489
            DSG+H+I+RT
Sbjct:  155 DSGIHIILRT 164          
The following BLAST results are available for this feature:
BLAST of GO241611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PIN1_MALDO7.488e-4681.73Peptidyl-prolyl cis-trans isomerase 1 OS=Malus dom... [more]
PIN1_ARATH3.057e-4479.81Peptidyl-prolyl cis-trans isomerase 1 OS=Arabidops... [more]
PIN1_DIGLA3.500e-3971.43Peptidyl-prolyl cis-trans isomerase 1 OS=Digitalis... [more]
DOD_DROME8.277e-2248.08Protein dodo OS=Drosophila melanogaster GN=dod PE=... [more]
PIN1_RHIOR7.614e-2149.51Peptidyl-prolyl cis-trans isomerase pin1 OS=Rhizop... [more]
PIN1_MACFA4.785e-2047.57Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]
PIN1_HUMAN4.785e-2047.57Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]
PIN1_BOVIN4.785e-2047.57Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]
SSP1_NEUCR5.932e-2047.57Peptidyl-prolyl cis-trans isomerase ssp-1 OS=Neuro... [more]
PIN1_MOUSE1.369e-1946.60Peptidyl-prolyl cis-trans isomerase NIMA-interacti... [more]

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Properties
Property NameValue
Genbank description259 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 381 5, mRNA sequence.