GO241608

Overview
NameGO241608
Unique NameGO241608
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_ARATH (V-type proton ATPase subunit D OS=Arabidopsis thaliana GN=VHA-D PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.709e-26
Identity = 72/130 (55.38%), Postives = 80/130 (61.54%), Query Frame = 1
Query:  163 QNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXVL--RFQSLSTSLMARPRMXLYRXGLEV 546
            QN RL VVPTVTMLGVMK+RLVGATRGHALLKKKSDALTVQFR +LK IVT KESMG++MK SSFAL E   +       + L   K   LK      NIA V   +F   S          L R G +V
Sbjct:    4 QNARLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRALLKKIVTAKESMGDMMKTSSFALTEVKYVAGDNVKHVVLENVKEATLKVRSRTENIAGVKLPKFDHFSEGETKNDLTGLARGGQQV 133          

HSP 2 Score: 21.1718 bits (43), Expect = 2.709e-26
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  142 KAIEVLVELASLQTS 156          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_YEAST (V-type proton ATPase subunit D OS=Saccharomyces cerevisiae GN=VMA8 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 1.810e-16
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 1
Query:  172 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEAS 375
            R  V PT   LG+MK++L GA +G++LLK+KS+ALT +FR I K I   K+ MG VM+ ++F+L E S
Sbjct:    5 REQVFPTRMTLGLMKTKLKGANQGYSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVS 72          

HSP 2 Score: 39.2762 bits (90), Expect = 1.810e-16
Identity = 24/58 (41.38%), Postives = 31/58 (53.45%), Query Frame = 3
Query:  375 YVAGENIKHIVLENVQNASIKVRSRQXXYCXGVKIPKFEYFTDGETKNDXLQIXARGG 548
            Y  GENI + V E+V  A  KVR+RQ     GV + +FE + D E  +  L    RGG
Sbjct:   73 YATGENIGYQVQESVSTARFKVRARQEN-VSGVYLSQFESYIDPEINDFRLTGLGRGG 129          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_CANAL (V-type proton ATPase subunit D OS=Candida albicans GN=VMA8 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.162e-16
Identity = 35/66 (53.03%), Postives = 46/66 (69.70%), Query Frame = 1
Query:  172 RLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIE 369
            R  V PT   LGVMKS+L GA +GH+LLK+KS+ALT +FR I + I   K  MG VM+ ++F+L E
Sbjct:    7 REQVFPTRMTLGVMKSKLKGAQQGHSLLKRKSEALTKRFRDITQRIDDAKRKMGRVMQTAAFSLAE 72          

HSP 2 Score: 37.3502 bits (85), Expect = 5.162e-16
Identity = 21/59 (35.59%), Postives = 32/59 (54.24%), Query Frame = 3
Query:  372 QYVAGENIKHIVLENVQNASIKVRSRQXXYCXGVKIPKFEYFTDGETKNDXLQIXARGG 548
            QY  G+NI + V E+VQ A   V+++Q     GV +P F+   + +  +  L   ARGG
Sbjct:   74 QYATGDNISYQVQESVQKARFTVKAKQEN-VSGVFLPTFDSHINEDVNDFKLTALARGG 131          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_SUBDO (V-type proton ATPase subunit D OS=Suberites domuncula GN=VATPD PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.593e-15
Identity = 46/105 (43.81%), Postives = 68/105 (64.76%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ V P+   L +MK+RL GA +GH+LLK+K+DALT++FRQIL  I+ TK  MGEVMK+++F+L EA   +A   S + L+      ++    K N+A V
Sbjct:    1 MSGKDRINVFPSRMALTLMKARLKGAQKGHSLLKRKADALTLRFRQILGKIIETKTLMGEVMKEATFSLAEAK-FVAGDFSEMVLQNVDKAKIRLHTKKDNVAGV 104          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_PONAB (V-type proton ATPase subunit D OS=Pongo abelii GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.474e-15
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EA       S+T+   + K   +K    K N+A V
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNK-AQVKIRAKKDNVAGV 104          

HSP 2 Score: 21.1718 bits (43), Expect = 5.474e-15
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  140 KAVELLVELASLQTS 154          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_MOUSE (V-type proton ATPase subunit D OS=Mus musculus GN=Atp6v1d PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.474e-15
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EA       S+T+   + K   +K    K N+A V
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNK-AQVKIRAKKDNVAGV 104          

HSP 2 Score: 21.1718 bits (43), Expect = 5.474e-15
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  140 KAVELLVELASLQTS 154          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_HUMAN (V-type proton ATPase subunit D OS=Homo sapiens GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.474e-15
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EA       S+T+   + K   +K    K N+A V
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNK-AQVKIRAKKDNVAGV 104          

HSP 2 Score: 21.1718 bits (43), Expect = 5.474e-15
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  140 KAVELLVELASLQTS 154          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_BOVIN (V-type proton ATPase subunit D OS=Bos taurus GN=ATP6V1D PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 5.474e-15
Identity = 46/105 (43.81%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EA       S+T+   + K   +K    K N+A V
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTVIQNVNK-AQVKIRAKKDNVAGV 104          

HSP 2 Score: 21.1718 bits (43), Expect = 5.474e-15
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  140 KAVELLVELASLQTS 154          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_DICDI (V-type proton ATPase subunit D OS=Dictyostelium discoideum GN=atp6v1d PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 6.054e-15
Identity = 41/83 (49.40%), Postives = 57/83 (68.67%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTL 405
            M+   RL + PT   L VMK++L GA  GH+LLKKKSDALT++FR+IL NIV  K+ MG  M+D+SF+L  A     + S+++
Sbjct:    1 MSGKNRLNIFPTRMALTVMKTKLKGAVTGHSLLKKKSDALTIRFRRILANIVENKQLMGTTMRDASFSLAAAKYAAGEFSNSV 83          
BLAST of GO241608 vs. ExPASy Swiss-Prot
Match: VATD_RABIT (V-type proton ATPase subunit D OS=Oryctolagus cuniculus GN=ATP6V1D PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.244e-15
Identity = 46/105 (43.81%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  157 MAQNQRLTVVPTVTMLGVMKSRLVGATRGHALLKKKSDALTVQFRQILKNIVTTKESMGEVMKDSSFALIEASMLLAKTSSTLFLRMCKMLLLKFDPVKXNIAXV 471
            M+   R+ + P+     +MK+RL GA  G  LLKKKSDALT++FRQILK I+ TK  MGEVM++++F+L EA       S+T    + K   +K    K N+A V
Sbjct:    1 MSGKDRIEIFPSRMAQTIMKARLKGAQTGRNLLKKKSDALTLRFRQILKKIIETKMLMGEVMREAAFSLAEAKFTAGDFSTTAIQNVNK-AQVKIRAKKDNVAGV 104          

HSP 2 Score: 21.1718 bits (43), Expect = 9.244e-15
Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  587 KPLSFXVELASLQTS 631
            K +   VELASLQTS
Sbjct:  140 KAVELLVELASLQTS 154          
The following BLAST results are available for this feature:
BLAST of GO241608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
VATD_ARATH2.709e-2655.38V-type proton ATPase subunit D OS=Arabidopsis thal... [more]
VATD_YEAST1.810e-1650.00V-type proton ATPase subunit D OS=Saccharomyces ce... [more]
VATD_CANAL5.162e-1653.03V-type proton ATPase subunit D OS=Candida albicans... [more]
VATD_SUBDO1.593e-1543.81V-type proton ATPase subunit D OS=Suberites domunc... [more]
VATD_PONAB5.474e-1543.81V-type proton ATPase subunit D OS=Pongo abelii GN=... [more]
VATD_MOUSE5.474e-1543.81V-type proton ATPase subunit D OS=Mus musculus GN=... [more]
VATD_HUMAN5.474e-1543.81V-type proton ATPase subunit D OS=Homo sapiens GN=... [more]
VATD_BOVIN5.474e-1543.81V-type proton ATPase subunit D OS=Bos taurus GN=AT... [more]
VATD_DICDI6.054e-1549.40V-type proton ATPase subunit D OS=Dictyostelium di... [more]
VATD_RABIT9.244e-1543.81V-type proton ATPase subunit D OS=Oryctolagus cuni... [more]

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Properties
Property NameValue
Genbank description256 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 378 5, mRNA sequence.