GO241605

Overview
NameGO241605
Unique NameGO241605
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12826 contig Csv1_Contig12826:912..1473. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 7.749e-42
Identity = 78/110 (70.91%), Postives = 94/110 (85.45%), Query Frame = 1
Query:   76 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            AEEGQVI CHTVE+WNEQLQKG   K LIVVDFTASWC PC+ ++P L+ELAKKLP V FLKV+VDELK+VA EWAVE+MPTF+  KEGK+++++VGAKKDELQ  + +H
Sbjct:    3 AEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIAKH 112          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.119e-40
Identity = 77/111 (69.37%), Postives = 93/111 (83.78%), Query Frame = 1
Query:   73 MAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            MAEEGQVI  HTV++WNE LQKGI  KKLIVVDFTASWC PCK ++   +ELAKK+P V FLKV+VDELKSVA +WAVEAMPTF+  KEGK+++++VGAKKDELQ  + +H
Sbjct:    1 MAEEGQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKH 111          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 2.493e-40
Identity = 72/110 (65.45%), Postives = 94/110 (85.45%), Query Frame = 1
Query:   76 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            +EEGQVI+CHTVE+WNEQLQK   +K L+VVDFTASWC PC+ ++P  ++LAKKLP V+FLKV+ DELKSVA +WA++AMPTF+  KEGK+L+++VGAKKDELQ  + +H
Sbjct:    3 SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKH 112          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39
Identity = 71/111 (63.96%), Postives = 93/111 (83.78%), Query Frame = 1
Query:   76 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHA 408
            +EEGQV  CH VE WNE  +KG+  KKL+VVDFTASWC PC+ ++PIL+++AKK+P VIFLKV+VDELK+V+ EW+VEAMPTFV  K+GK ++R+VGAKK+ELQ  + +HA
Sbjct:    9 SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHA 119          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 3.725e-36
Identity = 71/114 (62.28%), Postives = 91/114 (79.82%), Query Frame = 1
Query:   73 MAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHATV 414
            MAEE QVI+CHTV+ WNE+ QK   + KLIV+DFTASWC PC++++P +SELAKK P V F KV+VD+LK VAEE+ VEAMP+FV+ KEG+ +ERIVGA+KDEL   +  HA +
Sbjct:    1 MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIAVHAPI 114          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH5_ARATH (Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TRX5 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.565e-34
Identity = 62/111 (55.86%), Postives = 90/111 (81.08%), Query Frame = 1
Query:   73 MAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERH 405
            MA EG+VI+CHT+E WNE+++    +KKLIV+DFTASWCPPC+ ++P+ +E+AKK   V+F K++VDEL++VA+E+ VEAMPTFV  KEG +++R+VGA KDE+   + +H
Sbjct:    1 MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKH 111          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH3_ARATH (Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TRX3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 4.554e-34
Identity = 64/114 (56.14%), Postives = 90/114 (78.95%), Query Frame = 1
Query:   73 MAEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHATV 414
            MA EG+VI+CHTVE W E+L+    +KKLIV+DFTA+WCPPC+ ++P+ ++LAKK   V+F KV+VDEL +VAEE+ V+AMPTF+  KEG++ E +VGA K+E+   +E+H TV
Sbjct:    1 MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 141.354 bits (355), Expect = 2.952e-33
Identity = 64/108 (59.26%), Postives = 87/108 (80.56%), Query Frame = 1
Query:   85 GQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHA 408
            G+VIS H++E W  Q+++  AAKKL+V+DFTASWC PC++M+PI ++LAKK PA +FLKV+VDELK +AE+++VEAMPTF+  KEG V +R+VGA K+EL   V  HA
Sbjct:   18 GEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLHA 125          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH4_ARATH (Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TRX4 PE=2 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 8.588e-33
Identity = 65/114 (57.02%), Postives = 89/114 (78.07%), Query Frame = 1
Query:   76 AEEGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKK-LPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAVERHATV 414
            AEEGQVI CHT + W  QL K   + KLIV+DFTASWCPPC++++PI ++LAKK + + IF KV+VDEL+SVA+E+ VEAMPTFV  K G+V++++VGA K++LQ  + +H  V
Sbjct:    3 AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAIFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGV 116          
BLAST of GO241605 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.263e-32
Identity = 57/105 (54.29%), Postives = 81/105 (77.14%), Query Frame = 1
Query:   82 EGQVISCHTVESWNEQLQKGIAAKKLIVVDFTASWCPPCKLMSPILSELAKKLPAVIFLKVNVDELKSVAEEWAVEAMPTFVLAKEGKVLERIVGAKKDELQLAV 396
            EG V +CH+ E W  +LQ+ I  K+L+ VDFTA+WC PC+++ P+  EL+KK P + FLKV+VDEL+ VA+EW VEAMPTF+  K+GK ++++VGAKKD+L+  V
Sbjct:    3 EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKV 107          
The following BLAST results are available for this feature:
BLAST of GO241605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
TRXH_RICCO7.749e-4270.91Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
TRXH2_TOBAC1.119e-4069.37Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=... [more]
TRXH1_ARATH2.493e-4065.45Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TR... [more]
TRXH1_TOBAC2.110e-3963.96Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=... [more]
TRXH_FAGES3.725e-3662.28Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV... [more]
TRXH5_ARATH1.565e-3455.86Thioredoxin H-type 5 OS=Arabidopsis thaliana GN=TR... [more]
TRXH3_ARATH4.554e-3456.14Thioredoxin H-type 3 OS=Arabidopsis thaliana GN=TR... [more]
TRXH_WHEAT2.952e-3359.26Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3[more]
TRXH4_ARATH8.588e-3357.02Thioredoxin H-type 4 OS=Arabidopsis thaliana GN=TR... [more]
TRXH_PICMA3.263e-3254.29Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 S... [more]

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Properties
Property NameValue
Genbank description253 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 375 5, mRNA sequence.