GO241599

Overview
NameGO241599
Unique NameGO241599
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241599 vs. ExPASy Swiss-Prot
Match: HS217_ARATH (21.7 kDa class VI heat shock protein OS=Arabidopsis thaliana GN=HSP21.7 PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 9.925e-55
Identity = 94/143 (65.73%), Postives = 113/143 (79.02%), Query Frame = 1
Query:   52 IKLEVHTDDRTPHKWIVALGEDVFRRFLSQGNPAVHKAFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVE-NGKIVEISGQWKDQRDPRA-KDWRSGHWWEHG 474
            +KLE+HTDD+TP KW V LG+DVFRRFLS G  +    FG+GSLFSP LFGK+FDPSDAFPLWEFE++VLL+ L+S GQ  VDW QTDQAYVLK+++P VGKN VQV V+ NG+++EISGQW   +      DWRSG WWEHG
Sbjct:    8 LKLEIHTDDKTPGKWSVPLGDDVFRRFLSGGGGSEKAVFGEGSLFSPFLFGKYFDPSDAFPLWEFEAEVLLASLRSLGQCRVDWSQTDQAYVLKSDIPVVGKNNVQVYVDINGRVMEISGQWNSNKKAATNSDWRSGRWWEHG 150          

HSP 2 Score: 31.9574 bits (71), Expect = 9.925e-55
Identity = 19/34 (55.88%), Postives = 22/34 (64.71%), Query Frame = 3
Query:  477 VRRLELXEDADWKKTEPYWSND---VFLVXRIPK 569
            VRRLEL  DAD K +E + SN+    FL  RIPK
Sbjct:  152 VRRLELPSDADAKYSEAFLSNNDDYSFLEIRIPK 185          
BLAST of GO241599 vs. ExPASy Swiss-Prot
Match: HS223_ORYSJ (22.3 kDa class VI heat shock protein OS=Oryza sativa subsp. japonica GN=HSP22.3 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 3.530e-35
Identity = 66/152 (43.42%), Postives = 94/152 (61.84%), Query Frame = 1
Query:   52 IKLEVHTDDRTPHKWIVALGEDVFRRFLSQ-------GNPAVHKAFGDGSLFSPLLFGKFFDPSDAFPLWEFESDVLLSHLQSTGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENG-KIVEISGQWK---DQRDPRAKDWRSGHWWEHG 474
            I++     D    +W ++L E+ F  FL            A    FG+GSLFSP LFGKFFDP+DAFPLWEFE +VLL+ L+   +++VDW +TD  Y L+A++PG  K  V+VS ++  ++V++SG W+       P  +DWR+G WWEHG
Sbjct:    7 IEVRQAVGDGAAPRWRMSLLENTFSSFLQSIGGGVAADGAAARAVFGEGSLFSPFLFGKFFDPADAFPLWEFEPEVLLAALRRGARTTVDWAETDSEYYLRADIPGGRKCDVEVSGDDAMRVVDVSGLWRAAPPPPPPDGRDWRAGRWWEHG 158          

HSP 2 Score: 34.6538 bits (78), Expect = 3.530e-35
Identity = 17/41 (41.46%), Postives = 26/41 (63.41%), Query Frame = 3
Query:  465 GTW----IVRRLELXEDADWKKTEPYWSN-DVFLVXRIPKN 572
            G W     VRR+EL EDADW+K E ++ + +  L  ++PK+
Sbjct:  152 GRWWEHGFVRRVELPEDADWRKVEAFFDDGEGLLEIKVPKS 192          
The following BLAST results are available for this feature:
BLAST of GO241599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
HS217_ARATH9.925e-5565.7321.7 kDa class VI heat shock protein OS=Arabidopsi... [more]
HS223_ORYSJ3.530e-3543.4222.3 kDa class VI heat shock protein OS=Oryza sati... [more]
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Properties
Property NameValue
Genbank description247 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 368 5, mRNA sequence.