GO241595

Overview
NameGO241595
Unique NameGO241595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241595_ssr260 microsatellite GO241595_ssr260:260..271. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig949 contig Csv1_Contig949:502..1115. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C60_ARATH (Probable protein phosphatase 2C 60 OS=Arabidopsis thaliana GN=At4g31860 PE=2 SV=1)

HSP 1 Score: 371.318 bits (952), Expect = 2.105e-102
Identity = 176/204 (86.27%), Postives = 192/204 (94.12%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWRA+MEDAHAA  DLDD+TSF GVYDGHGGKVV+KFCAK+LHQQVL ++AYAAGDVGTS+QKAFFRMDEMM+GQRGWRELAVLGDKINKF+GMIEGLIWSPR GDS ++P+ WAFEEGPHSDFAGP SGSTACVA++R+  L VANAGDSRCVISRK QAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNL+RAIGDM
Sbjct:   31 GWRASMEDAHAAILDLDDNTSFLGVYDGHGGKVVSKFCAKYLHQQVLSDEAYAAGDVGTSLQKAFFRMDEMMQGQRGWRELAVLGDKINKFSGMIEGLIWSPRSGDSANKPDAWAFEEGPHSDFAGPNSGSTACVAVVRDKQLFVANAGDSRCVISRKNQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLSRAIGDM 234          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C21_ARATH (Probable protein phosphatase 2C 21 OS=Arabidopsis thaliana GN=PPC4-2 PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 7.008e-98
Identity = 165/204 (80.88%), Postives = 184/204 (90.20%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWRATMEDAHAA  DLDD TSFFGVYDGHGGKVVAKFCAK+LHQQV+ N+AY  GDV TS+++AFFRMD+MM+GQRGWRELAVLGDK+NKF+GMIEG IWSPR GD+N+QP+ W  E+GPHSDF GPTSG TACVA+I++  L VANAGDSRCVISRK QAYNLS+DHKPDLE EKERILKAGGFIHAGR+NGSLNL RAIGDM
Sbjct:   31 GWRATMEDAHAAILDLDDKTSFFGVYDGHGGKVVAKFCAKYLHQQVISNEAYKTGDVETSLRRAFFRMDDMMQGQRGWRELAVLGDKMNKFSGMIEGFIWSPRSGDTNNQPDSWPLEDGPHSDFTGPTSGCTACVALIKDKKLFVANAGDSRCVISRKSQAYNLSKDHKPDLEVEKERILKAGGFIHAGRINGSLNLTRAIGDM 234          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C58_ORYSJ (Probable protein phosphatase 2C 58 OS=Oryza sativa subsp. japonica GN=Os06g0651600 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 2.945e-96
Identity = 160/204 (78.43%), Postives = 188/204 (92.16%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWRATMEDAH+A  D+D+ TSFFGV+DGHGG+VVAKFCAK+LH++VL+++AY+AGD+G +  KAFFRMDEMM+GQRGWREL  LGDKIN+ +GMIEGLIWSPRG DSNDQ +DWAFEEGPHSDFAGPT GSTACVAI+RN+ L+VANAGDSRCVISR GQAYNLSRDHKP+LEAE+ERILKAGG+I  GRVNG++NL+RAIGD+
Sbjct:   31 GWRATMEDAHSALLDIDNDTSFFGVFDGHGGRVVAKFCAKYLHREVLRSEAYSAGDLGNAAHKAFFRMDEMMRGQRGWRELQALGDKINQISGMIEGLIWSPRGSDSNDQHDDWAFEEGPHSDFAGPTCGSTACVAIVRNSQLVVANAGDSRCVISRNGQAYNLSRDHKPELEAERERILKAGGYIQMGRVNGTINLSRAIGDI 234          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C11_ORYSJ (Probable protein phosphatase 2C 11 OS=Oryza sativa subsp. japonica GN=Os02g0180000 PE=2 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 3.846e-96
Identity = 161/204 (78.92%), Postives = 186/204 (91.18%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWRA MEDAH+A  +LD+ TSFFGV+DGHGG+VVAKFCAK+LH QVL+++AY+AGD+GT+V +AFFRMDEMM+GQRGWREL+ LGDKINK  GMIEGLIWSPRG DSN+  +DW+FEEGPHSDFAGPT G TACVA+IRNN L+VANAGDSRCVISR GQAYNLSRDHKP+LEAE++RI+KAGGFIH GR+NGSLNL RAIGDM
Sbjct:   31 GWRANMEDAHSALLNLDNETSFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMMRGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCGCTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHMGRINGSLNLTRAIGDM 234          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 333.183 bits (853), Expect = 6.354e-91
Identity = 162/204 (79.41%), Postives = 180/204 (88.24%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWR TMEDAH A P LD+ TSFFGVYDGHGGK V+KFCAK LH QVLKN+AY++GD+ TSV K+FFRMDEMMKGQRGWRELA LGDK  KFTGM+EG+IWSP+ G+S D+P D   EEGPHS F GPTSGSTACVAIIRN+ LIVANAGDSRCV+SRKG+AY+LS+DHKPDL+AEKERIL AGGFI AGRVNGSLNLARAIGDM
Sbjct:   31 GWRTTMEDAHTALPRLDECTSFFGVYDGHGGKAVSKFCAKHLHLQVLKNEAYSSGDLATSVLKSFFRMDEMMKGQRGWRELAELGDKGQKFTGMLEGIIWSPKPGES-DKPEDTWTEEGPHSHFPGPTSGSTACVAIIRNDELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIVAGRVNGSLNLARAIGDM 233          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C42_ORYSJ (Probable protein phosphatase 2C 42 OS=Oryza sativa subsp. japonica GN=Os04g0500900 PE=2 SV=4)

HSP 1 Score: 155.992 bits (393), Expect = 1.390e-37
Identity = 92/215 (42.79%), Postives = 130/215 (60.47%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLD--DSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDW----AFEEGPHSDFAGP-TSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIH----AGRVNGSLNLARAIGDM 612
            G+R+TMEDAHA   +LD   +TSFFGVYDGHGG  VA++CA  LH +VL+ + +++ ++  +++++FFRMDEM++ Q   +EL   G   N++        W   G         W        GP   + GP   G TACV +IRN  ++V NAGD+RCVISR GQA  LS DHKP+   E +RI+ AGG +     + RVN  + ++RAIGD+
Sbjct:   34 GYRSTMEDAHATIENLDALTNTSFFGVYDGHGGSAVARYCANHLHNKVLEQEDFSS-NLANALRQSFFRMDEMLRNQAASKELTEYGSG-NEY--------WRTAG-------RSWLRCAPCVLGP--VYCGPLAEGCTACVVLIRNTQIVVGNAGDARCVISRNGQAIALSNDHKPNFPEETQRIVAAGGSVSFSRGSHRVNNGIAVSRAIGDL 229          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C21_ORYSJ (Probable protein phosphatase 2C 21 OS=Oryza sativa subsp. japonica GN=Os02g0606900 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 8.434e-35
Identity = 89/204 (43.63%), Postives = 115/204 (56.37%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGD 609
            G+R  MEDA A   DLD +TSFFGVYDGHGG  VA +CAK  H  +L++  Y   ++  ++    FR+D+ ++    WRE        N  T +   L                 F E    D+  P+  GSTACV IIR N +IV N GDSRCV+S+ GQA +LS DHKP  EAE+ERI +AGG +   R+ G L  +RAIGD
Sbjct:   32 GFRPHMEDALAVELDLDATTSFFGVYDGHGGAEVAMYCAKRFHTMLLEDVDYI-NNLPNAITSVCFRLDDDLQRSNEWRESLNPCANRNCLTNICANL---------------HHFTE----DYVPPSYEGSTACVVIIRGNQIIVGNVGDSRCVLSKNGQAISLSFDHKPHHEAERERIQRAGGHVFLQRILGMLATSRAIGD 215          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 5.467e-34
Identity = 84/186 (45.16%), Postives = 115/186 (61.83%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDS-TSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPT-SGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGG 552
            GW   MEDAHAA  +LDD+ TSFFGVYDGHGG  VA +CAK  H ++  ++ Y + ++  +++ AF+ MDE ++    WREL +   + N +   I+       G  +N  P        P + +  P+  GSTACV +IR + LIV +AGDSRCV+SR GQA  LS DHKPD E+E+ER+  AGG
Sbjct:   78 GWGEKMEDAHAAILNLDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDS-NLSNAMRSAFYSMDEDLQLSDAWRELVI--PRNNGWMYFIKA------GVCANLSPF-------PQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQNAGG 247          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PP2C2_PARTE (Probable protein phosphatase 2C 2 OS=Paramecium tetraurelia GN=GSPATT00030171001 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.591e-33
Identity = 83/204 (40.69%), Postives = 112/204 (54.90%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWR TMEDAH   PD+    S FGV+DGHGG+ VA+F  K    ++LKNK +       ++++ F +MDE++    G +EL       N++               + D    +A              G TA VA+I  N L VANAGDSR V+ R    Y++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+
Sbjct:   31 GWRNTMEDAHIHKPDVIQDVSIFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEEALKETFLKMDELLVTPEGQKEL-------NQYK--------------ATDTDESYA--------------GCTANVALIYKNTLYVANAGDSRTVLCRNNANYDMSVDHKPDNPEEKSRIERAGGFVSDGRVNGNLNLSRALGDL 199          
BLAST of GO241595 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 2.713e-33
Identity = 82/204 (40.20%), Postives = 111/204 (54.41%), Query Frame = 1
Query:    1 GWRATMEDAHAAYPDLDDSTSFFGVYDGHGGKVVAKFCAKFLHQQVLKNKAYAAGDVGTSVQKAFFRMDEMMKGQRGWRELAVLGDKINKFTGMIEGLIWSPRGGDSNDQPNDWAFEEGPHSDFAGPTSGSTACVAIIRNNHLIVANAGDSRCVISRKGQAYNLSRDHKPDLEAEKERILKAGGFIHAGRVNGSLNLARAIGDM 612
            GWR TMEDAH   PD+    S FGV+DGHGG+ VA+F  K    ++LKNK +       ++++ F +MDE++    G +EL       N +               + D    +A              G TA VA+I  N L VANAGDSR V+ R    +++S DHKPD   EK RI +AGGF+  GRVNG+LNL+RA+GD+
Sbjct:   31 GWRNTMEDAHIHRPDIVQDVSVFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKEL-------NNYK--------------ATDTDESYA--------------GCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIERAGGFVSDGRVNGNLNLSRALGDL 199          
The following BLAST results are available for this feature:
BLAST of GO241595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
P2C60_ARATH2.105e-10286.27Probable protein phosphatase 2C 60 OS=Arabidopsis ... [more]
P2C21_ARATH7.008e-9880.88Probable protein phosphatase 2C 21 OS=Arabidopsis ... [more]
P2C58_ORYSJ2.945e-9678.43Probable protein phosphatase 2C 58 OS=Oryza sativa... [more]
P2C11_ORYSJ3.846e-9678.92Probable protein phosphatase 2C 11 OS=Oryza sativa... [more]
P2C70_ORYSJ6.354e-9179.41Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C42_ORYSJ1.390e-3742.79Probable protein phosphatase 2C 42 OS=Oryza sativa... [more]
P2C21_ORYSJ8.434e-3543.63Probable protein phosphatase 2C 21 OS=Oryza sativa... [more]
P2C20_ORYSJ5.467e-3445.16Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
PP2C2_PARTE1.591e-3340.69Probable protein phosphatase 2C 2 OS=Paramecium te... [more]
PP2C3_PARTE2.713e-3340.20Probable protein phosphatase 2C 3 OS=Paramecium te... [more]

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Properties
Property NameValue
Genbank description243 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 362 5, mRNA sequence.