GO241575

Overview
NameGO241575
Unique NameGO241575
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5453 contig Csv1_Contig5453:771..1376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241575 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 9.013e-13
Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 1
Query:   55 TQKSTRFCPEAA--MNNDRCNSEDVNSRKACRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFHEP 297
            T   TRFCPE +  + + + N+   +S    RS ++++R L+R RSLVDV+ QLLHRS  EE  KRRLFKTVG VE +GF  P
Sbjct:  478 THNMTRFCPEESSHLQSGQANAYAASS-STNRSLASDNRTLTRNRSLVDVQRQLLHRSPGEEARKRRLFKTVGDVETVGFQSP 559          
BLAST of GO241575 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.899e-11
Identity = 45/117 (38.46%), Postives = 61/117 (52.14%), Query Frame = 1
Query:    1 DDSEFSHRAGEPLCIARATQ----KSTRFCPEAAMNNDRCNSEDVNSRKACRSNSNNHRKLSRIRSLVDVRSQLLHRSLVEEIHKRRLFKTVGAVENIGFHEPANCAAYGRCPVSRS 339
            DDS  S  +     I+   Q     S+R  P +A  ++         R+         R++SR RS+VD+RSQLLHR+LVEE++KR  F TVGAV +IGF +P     YG    S S
Sbjct:  487 DDSSTSSLSAAVSAISLQQQHCSASSSRLGPASASASEDGGGHAGRPRQREGEEERRRRRMSRNRSMVDMRSQLLHRTLVEELNKRLFFNTVGAVHDIGFRDP---TTYGSSSSSSS 600          
The following BLAST results are available for this feature:
BLAST of GO241575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
WNK4_ARATH9.013e-1350.60Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK8_ORYSJ2.899e-1138.46Probable serine/threonine-protein kinase WNK8 OS=O... [more]
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Properties
Property NameValue
Genbank description223 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 339 5, mRNA sequence.