GO241562

Overview
NameGO241562
Unique NameGO241562
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5402 contig Csv1_Contig5402:21..643. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.578e-57
Identity = 96/156 (61.54%), Postives = 117/156 (75.00%), Query Frame = 3
Query:   60 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFG 524
            IKVHGS  STAT RV A L EKEL++E VPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL     K +  + VW EVE  +F+PP++KL WEL  KP+ GMTTD AAV+E+EA+L+K+LD+Y  +L++SKY G
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLG 158          

HSP 2 Score: 50.0618 bits (118), Expect = 4.578e-57
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  520 LACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHV 624
            L  DSFTLVDLHH+PNI  L+ + VK++FD+RP V
Sbjct:  157 LGGDSFTLVDLHHIPNIYYLMSSKVKEVFDSRPRV 191          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 5.967e-57
Identity = 99/158 (62.66%), Postives = 122/158 (77.22%), Query Frame = 3
Query:   60 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIA--QEFPDKGTQLTCPGK-PIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFG 524
            IKVHG+  STATQRV  +LYEK LE+E VP+DM AG HK+ ++L+LNPFGQVP LE G+ KLFESRAIT+Y+A   +  ++GT L    K  +A  LVW+EVEA QFDP +SKL WELV+K +FGM TD   VEENEAKLAK+LDVY ARL++S+Y G
Sbjct:    3 IKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLG 160          

HSP 2 Score: 51.6026 bits (122), Expect = 5.967e-57
Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 1
Query:  523 ACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHV 624
            A DSFTLVDLHHLP +  L+GT VKKLF+ R HV
Sbjct:  161 ANDSFTLVDLHHLPLLGYLMGTQVKKLFEERAHV 194          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 2.248e-56
Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 3
Query:   60 IKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLL-VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFG 524
            IKVHGS  STAT RV A L EK+L++ELVPVDM +GEHKK  +LSLNPFGQVP  E GD KLFESRAITQYIA  + D G QL        P++ VW EVE  +F+P +SKL WEL  KP+ GMTTD  AV+E+E +L+K+LD+Y  RL++SKY G
Sbjct:    3 IKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLG 158          

HSP 2 Score: 51.6026 bits (122), Expect = 2.248e-56
Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1
Query:  520 LACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHV 624
            L  DSFTLVDLHH+PNI  L+ T VK++FD+RP V
Sbjct:  157 LGGDSFTLVDLHHIPNIYYLMSTKVKEVFDSRPRV 191          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GST16_ARATH (Glutathione S-transferase 16 OS=Arabidopsis thaliana GN=GST16 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.621e-51
Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPIAPLLVWK---EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKY 518
            MAGIKV G   ST+T+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K IA   +     +VEA QFDP +SKL WE V+K  +G+ TD A V E EAKLAK+LDVY ARL + KY
Sbjct:    1 MAGIKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLPADSKNIAQYAIMSIGIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVLDVYEARLKEFKY 160          

HSP 2 Score: 50.0618 bits (118), Expect = 2.621e-51
Identity = 23/35 (65.71%), Postives = 26/35 (74.29%), Query Frame = 1
Query:  520 LACDSFTLVDLHHLPNINLLLGTPVKKLFDARPHV 624
            LA ++FTL DLHH+P I  LLGTP KKLF  RP V
Sbjct:  161 LAGETFTLTDLHHIPVIQYLLGTPTKKLFTERPRV 195          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 8.114e-49
Identity = 99/177 (55.93%), Postives = 124/177 (70.06%), Query Frame = 3
Query:   57 GIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTC-PGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFGVRQLHLGRFASSPQY*FVVG 584
            G+K+HG   S A  RV A+L EK+L++ELVPV+M+AG+HKKE F++LNPFGQVP  E GD KLFESRAITQYIA  + DKG QL     K +A + VW EVE+ +FDP +SKL +E+V KPM GM TD AAV ENE KL K+LDVY +RL  SKY G     L     +P   +++G
Sbjct:    2 GMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMG 178          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 192.971 bits (489), Expect = 1.060e-48
Identity = 101/180 (56.11%), Postives = 128/180 (71.11%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFGVRQLHLGRFASSPQY*FVVG 584
            MA IKVHG   STAT RV A+LYEK+L++EL+PVDM+AG HK+EA L+LNPFGQ+P LE GD  LFESRAITQY+A+E+ +KG +L      K  A   VW +VE  QFDP +SKL +E V+K MFGMTTDPAAV+E E KL K+LDVY ARL++S++       L      P   +++G
Sbjct:   49 MASIKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLG 228          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF1_ARATH (Glutathione S-transferase 1 OS=Arabidopsis thaliana GN=GST1 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.692e-46
Identity = 96/178 (53.93%), Postives = 121/178 (67.98%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFGVRQLHLGRFASSPQY*FVVG 584
            MAGIKV G   STAT+RV  +L+EK +++E V V++K GEHKKE F+  NPFG+VP  E GD K+FESRAITQYIA EF DKG  L   GK +A + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVY  RL +SKY       L    + P   +++G
Sbjct:    1 MAGIKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLG 178          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GST11_ARATH (Glutathione S-transferase 11 OS=Arabidopsis thaliana GN=GST11 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.443e-45
Identity = 97/179 (54.19%), Postives = 122/179 (68.16%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPG-KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFGVRQLHLGRFASSPQY*FVVG 584
            MAGIKV G   STAT+RV  +L+EK L++E V +++K GEHKKE F+  NPFG+VP  E GD KLFESRAITQYIA  + DKG QL   G K IA + +  E+E+ +FDP  SKL WE V KP++GMTTD   VEE EAKLAK+LDVY  RL +SKY    +  L    + P   +++G
Sbjct:    1 MAGIKVFGHPASTATRRVLIALHEKNLDFEFVHIELKDGEHKKEPFIFRNPFGKVPAFEDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWEQVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLLG 179          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 169.088 bits (427), Expect = 1.639e-41
Identity = 95/182 (52.20%), Postives = 120/182 (65.93%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQ-LTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKYFGVRQLHLGRFASSPQY*FVVG 584
            MAGIKV G   S AT+RV  +L+EK L++ELV V++K GEHKKE FLS NPFGQVP  E GD KLFESRAITQYIA  + ++GT  L    K I   A + +  +VE  QFDP +SKL +E ++K ++G+TTD A V E EAKLAK+LDVY ARL + KY       L      P   +++G
Sbjct:    1 MAGIKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLG 182          
BLAST of GO241562 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 141.354 bits (355), Expect = 3.659e-33
Identity = 73/156 (46.79%), Postives = 102/156 (65.38%), Query Frame = 3
Query:   51 MAGIKVHGSVFSTATQRVFASLYEKELEYELVPVDMKAGEHKKEAFLSLNPFGQVPVLEHGDQKLFESRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYXARLSQSKY 518
            MA +K++G   S    RV   L EK L++E+VPVD+  G HK+  FL+LNPFGQ+P L  GD+ LFESRAI +YIA ++  +GT L       A L VW EVE+  F P +S L ++L+ +P+ G   D A VE++  +LAK+LDVY A L+++KY
Sbjct:    1 MAPLKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKY 156          
The following BLAST results are available for this feature:
BLAST of GO241562 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF1_TOBAC4.578e-5761.54Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF_SILCU5.967e-5762.66Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC2.248e-5660.90Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GST16_ARATH2.621e-5158.75Glutathione S-transferase 16 OS=Arabidopsis thalia... [more]
GSTF_HYOMU8.114e-4955.93Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF6_ARATH1.060e-4856.11Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF1_ARATH1.692e-4653.93Glutathione S-transferase 1 OS=Arabidopsis thalian... [more]
GST11_ARATH2.443e-4554.19Glutathione S-transferase 11 OS=Arabidopsis thalia... [more]
GSTF4_ARATH1.639e-4152.20Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]
GSTF3_MAIZE3.659e-3346.79Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank description210 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 326 5, mRNA sequence.