GO241552

Overview
NameGO241552
Unique NameGO241552
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1279 contig Csv1_Contig1279:30..608. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.254e-14
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.256e-14
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQKHASAEDIKKAYRKLALKWHPD---KNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB8_MOUSE (DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.616e-13
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 2
Query:  140 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            +YY VLGV   +S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR++YD
Sbjct:    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.616e-13
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 2
Query:  140 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            +YY VLGV   +S E+I++AYRKLA++WHPD   K P    +A+ KF+ + EAY VLSD +KR+LYD
Sbjct:    3 NYYEVLGVQASASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  ++S E+I++AYRKLA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYDVLGVQRNASPEDIKKAYRKLALKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRK A++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
BLAST of GO241552 vs. ExPASy Swiss-Prot
Match: DNJB6_MOUSE (DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1 SV=4)

HSP 1 Score: 74.7146 bits (182), Expect = 3.601e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2
Query:  143 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 340
            YY VLGV  H+S E+I++AYRK A++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66          
The following BLAST results are available for this feature:
BLAST of GO241552 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 114
Match NameE-valueIdentityDescription
DNJB6_BOVIN4.254e-1454.55DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJB6_PONAB7.256e-1454.55DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA7.256e-1454.55DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN7.256e-1454.55DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNJB6_CHICK7.256e-1453.03DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]
DNJB8_MOUSE1.616e-1352.24DnaJ homolog subfamily B member 8 OS=Mus musculus ... [more]
DNJB8_HUMAN1.616e-1353.73DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNJB6_XENTR2.757e-1353.03DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNJB6_RAT3.601e-1353.03DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNJB6_MOUSE3.601e-1353.03DnaJ homolog subfamily B member 6 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank description200 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 314 5, mRNA sequence.