GO241510

Overview
NameGO241510
Unique NameGO241510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241510_ssr120 microsatellite GO241510_ssr120:120..131. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig175 contig Csv1_Contig175:141..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CSD2B_XENLA (CDGSH iron sulfur domain-containing protein 2-B OS=Xenopus laevis GN=cisd2-B PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CSD2A_XENLA (CDGSH iron sulfur domain-containing protein 2-A OS=Xenopus laevis GN=cisd2-A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD2_XENTR (CDGSH iron sulfur domain-containing protein 2 OS=Xenopus tropicalis GN=cisd2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.844e-16
Identity = 38/63 (60.32%), Postives = 47/63 (74.60%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP+CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLHLAKAAYCRCWRSKTFPVCDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD2_MOUSE (CDGSH iron sulfur domain-containing protein 2 OS=Mus musculus GN=Cisd2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD2_HUMAN (CDGSH iron sulfur domain-containing protein 2 OS=Homo sapiens GN=CISD2 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD2_BOVIN (CDGSH iron sulfur domain-containing protein 2 OS=Bos taurus GN=CISD2 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.145e-16
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   KVV+ + + +L     AYCRCW S TFP CDGSH KHN+ TGDNVGPL+LKK+
Sbjct:   71 INLKIQKENPKVVNEINIEDLCLTKAAYCRCWRSKTFPACDGSHNKHNELTGDNVGPLILKKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD1_RAT (CDGSH iron sulfur domain-containing protein 1 OS=Rattus norvegicus GN=Cisd1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            +NL I+K   KVV +  + +L      YCRCW S  FP CDG+H+KHN+ TGDNVGPL++KK+
Sbjct:   45 VNLQIQKDNPKVVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHIKHNEETGDNVGPLIIKKK 106          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD1_MOUSE (CDGSH iron sulfur domain-containing protein 1 OS=Mus musculus GN=Cisd1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13
Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            +NL I+K   KVV +  + +L      YCRCW S  FP CDG+H+KHN+ TGDNVGPL++KK+
Sbjct:   45 VNLQIQKDNPKVVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHIKHNEETGDNVGPLIIKKK 106          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD2_DROME (CDGSH iron sulfur domain-containing protein 2 homolog OS=Drosophila melanogaster GN=CG1458 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 3
Query:  153 NLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKK 335
            N  IRK E KVVD + V ++++   A+CRCW +  +P CDGSH +HNK TGDNVGP+++KK
Sbjct:   74 NNHIRKNEPKVVDMIDVEDIAEK-AAFCRCWKTKNWPYCDGSHGEHNKQTGDNVGPIVIKK 133          
BLAST of GO241510 vs. ExPASy Swiss-Prot
Match: CISD1_HUMAN (CDGSH iron sulfur domain-containing protein 1 OS=Homo sapiens GN=CISD1 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.250e-13
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 3
Query:  150 INLDIRKTEEKVVDSVVVTELSKPLTAYCRCWGSGTFPLCDGSHVKHNKATGDNVGPLLLKKQ 338
            INL I+K   K+V +  + +L      YCRCW S  FP CDG+H KHN+ TGDNVGPL++KK+
Sbjct:   45 INLHIQKDNPKIVHAFDMEDLGDK-AVYCRCWRSKKFPFCDGAHTKHNEETGDNVGPLIIKKK 106          
The following BLAST results are available for this feature:
BLAST of GO241510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
CSD2B_XENLA1.844e-1660.32CDGSH iron sulfur domain-containing protein 2-B OS... [more]
CSD2A_XENLA1.844e-1660.32CDGSH iron sulfur domain-containing protein 2-A OS... [more]
CISD2_XENTR1.844e-1660.32CDGSH iron sulfur domain-containing protein 2 OS=X... [more]
CISD2_MOUSE3.145e-1660.32CDGSH iron sulfur domain-containing protein 2 OS=M... [more]
CISD2_HUMAN3.145e-1660.32CDGSH iron sulfur domain-containing protein 2 OS=H... [more]
CISD2_BOVIN3.145e-1660.32CDGSH iron sulfur domain-containing protein 2 OS=B... [more]
CISD1_RAT1.461e-1352.38CDGSH iron sulfur domain-containing protein 1 OS=R... [more]
CISD1_MOUSE1.461e-1352.38CDGSH iron sulfur domain-containing protein 1 OS=M... [more]
CISD2_DROME3.254e-1354.10CDGSH iron sulfur domain-containing protein 2 homo... [more]
CISD1_HUMAN4.250e-1352.38CDGSH iron sulfur domain-containing protein 1 OS=H... [more]

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Properties
Property NameValue
Genbank description158 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 266 5, mRNA sequence.