GO241483

Overview
NameGO241483
Unique NameGO241483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241483_ssr623 microsatellite GO241483_ssr623:623..632. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig6849 contig Csv1_Contig6849:253..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP17_ARATH (17.4 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.4A PE=1 SV=2)

HSP 1 Score: 208.379 bits (529), Expect = 5.022e-54
Identity = 98/136 (72.06%), Postives = 114/136 (83.82%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSL+PS FGGRRTNVFDPFSLDVWDPF+GFL+  LTNAP  A++ + F NA++DW+ETP+AHVFKAD+PGL+          G ILQISGERS E EEK+D WHRVERSSGKF+RRFRLP+NAKVE+VKASMENGV
Sbjct:    1 MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAP--AKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASMENGV 134          

HSP 2 Score: 22.7126 bits (47), Expect = 5.022e-54
Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            L+VTVPK +E KP
Sbjct:  135 LSVTVPKVQESKP 147          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 3.212e-53
Identity = 100/138 (72.46%), Postives = 116/138 (84.06%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFL--SSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIPSIFGGRR+NVFDPFS D+WDPF+GF   SSAL NA S+AR+ + F NAR+DWKETP+AHVFKADLPGL+            +LQISGERSKE EEKNDKWHRVER+SGKF+RRFRLP+NAK+E+VKA+MENGV
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANA-STARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGV 137          

HSP 2 Score: 23.483 bits (49), Expect = 3.212e-53
Identity = 10/13 (76.92%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTV VPK  EKKP
Sbjct:  138 LTVVVPKAPEKKP 150          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HS17C_ARATH (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 1.577e-52
Identity = 101/137 (73.72%), Postives = 114/137 (83.21%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLS-SALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIPSIFGGRRTNVFDPFSLDV+DPF+GFL+ S L NAP  A + + F NA++DW+ETP+AHVFKADLPGLR          G ILQISGERS E EEKNDKWHRVERSSGKF RRFRLP+NAK+E++KASMENGV
Sbjct:    1 MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAP--AMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASMENGV 135          

HSP 2 Score: 21.557 bits (44), Expect = 1.577e-52
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + PEVK+I+ISG
Sbjct:  146 KKPEVKSIDISG 157          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP11_DAUCA (17.8 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 5.112e-51
Identity = 94/136 (69.12%), Postives = 109/136 (80.15%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MS+IPS FGGRR+NVFDPFSLDVWDPF  F     ++A    +ET+ F N  IDWKETPQAHVFKADLPGL+          G++LQISGER+KE+EEKNDKWHRVERSSGKFLRRFRLP+NAKV++VKA+M NGV
Sbjct:    1 MSIIPSFFGGRRSNVFDPFSLDVWDPFKDF-PLVTSSASEFGKETAAFVNTHIDWKETPQAHVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGV 135          

HSP 2 Score: 23.0978 bits (48), Expect = 5.112e-51
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            +TVTVPK E KKP
Sbjct:  136 VTVTVPKVEIKKP 148          

HSP 3 Score: 22.7126 bits (47), Expect = 5.112e-51
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + PEVKAI+ISG
Sbjct:  146 KKPEVKAIDISG 157          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP16_SOYBN (18.5 kDa class I heat shock protein OS=Glycine max GN=HSP18.5-C PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.464e-50
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGF-----LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIP+ FGGRR NVFDPFSLDVWDPF  F     LSSA  + P  +RE S F + R+DWKETP+AHVFKAD+PGL+           ++LQISGER+ E+E+KND WHRVERSSGKF+RRFRLP+NAKVEQVKASMENGV
Sbjct:    1 MSLIPNFFGGRRNNVFDPFSLDVWDPFKDFPFPNTLSSA--SFPEFSRENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDKVLQISGERNVEKEDKNDTWHRVERSSGKFMRRFRLPENAKVEQVKASMENGV 139          

HSP 2 Score: 26.1794 bits (56), Expect = 1.464e-50
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:  140 LTVTVPKEEVKKP 152          

HSP 3 Score: 22.7126 bits (47), Expect = 1.464e-50
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + P+VKAIEISG
Sbjct:  150 KKPDVKAIEISG 161          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP13_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.205e-49
Identity = 93/137 (67.88%), Postives = 108/137 (78.83%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIPSIFGGRR+NVFDPFSLDVWDPF  F      + P+S + E S F N R+DWKETP+AHVF+AD+PGL+           R+LQISGER+ E+E+KND WHRVERSSG F+RRFRLP+NAKVEQVKASMENGV
Sbjct:    1 MSLIPSIFGGRRSNVFDPFSLDVWDPFKDF------HFPTSLSAENSAFVNTRVDWKETPEAHVFEADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKVEQVKASMENGV 131          

HSP 2 Score: 26.1794 bits (56), Expect = 1.205e-49
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:  132 LTVTVPKEEVKKP 144          

HSP 3 Score: 22.7126 bits (47), Expect = 1.205e-49
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + P+VKAIEISG
Sbjct:  142 KKPDVKAIEISG 153          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP11_SOYBN (17.3 kDa class I heat shock protein OS=Glycine max GN=HSP17.3-B PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.833e-48
Identity = 92/137 (67.15%), Postives = 107/137 (78.10%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSS-ARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIPS FGGRR++VFDPFSLDVWDPF  F        PSS + E S F + R+DWKETP+AHVFKAD+PGL+          GR+LQISGER+ E+E+KND WHRVERSSGK +RRFRLP+NAKV+QVKASMENGV
Sbjct:    1 MSLIPSFFGGRRSSVFDPFSLDVWDPFKDF------PFPSSLSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKLEIQDGRVLQISGERNVEKEDKNDTWHRVERSSGKLVRRFRLPENAKVDQVKASMENGV 131          

HSP 2 Score: 25.7942 bits (55), Expect = 2.833e-48
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:  132 LTVTVPKEEIKKP 144          

HSP 3 Score: 21.557 bits (44), Expect = 2.833e-48
Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + P+VKAI+ISG
Sbjct:  142 KKPDVKAIDISG 153          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP12_MEDSA (18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 2.863e-48
Identity = 90/136 (66.18%), Postives = 108/136 (79.41%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIPS FGGRR+NVFDPFSLDVWDPF  F  +    + S  RE S F + R+DWKETP+AHVFKADLPG++           R+LQISGERS E+E+KND+WHR+ERSSGKF+RRFRLP+NAK++QVKA+MENGV
Sbjct:    1 MSLIPSFFGGRRSNVFDPFSLDVWDPFKDFPFNNSALSASFPRENSAFVSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDDRVLQISGERSVEKEDKNDQWHRLERSSGKFMRRFRLPENAKMDQVKAAMENGV 136          

HSP 2 Score: 21.1718 bits (43), Expect = 2.863e-48
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + PEVK I+ISG
Sbjct:  147 KKPEVKTIDISG 158          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP14_SOYBN (17.5 kDa class I heat shock protein OS=Glycine max GN=HSP17.5-E PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.056e-47
Identity = 89/138 (64.49%), Postives = 105/138 (76.09%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGFLSSALTNAPSSA--RETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MSLIP  FGGRR+NVFDPFSLD+WDPF  F      + P+S+   E S F + R+DWKETP+AHVFKAD+PGL+           R+LQISGER+ E+E+KND WHRVERSSGKF RRFRLP+NAKV +VKASMENGV
Sbjct:    1 MSLIPGFFGGRRSNVFDPFSLDMWDPFKDF------HVPTSSVSAENSAFVSTRVDWKETPEAHVFKADIPGLKKEEVKVQIEDDRVLQISGERNVEKEDKNDTWHRVERSSGKFTRRFRLPENAKVNEVKASMENGV 132          

HSP 2 Score: 26.1794 bits (56), Expect = 1.056e-47
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK+E KKP
Sbjct:  133 LTVTVPKEEVKKP 145          

HSP 3 Score: 22.7126 bits (47), Expect = 1.056e-47
Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + P+VKAIEISG
Sbjct:  143 KKPDVKAIEISG 154          
BLAST of GO241483 vs. ExPASy Swiss-Prot
Match: HSP12_DAUCA (18.0 kDa class I heat shock protein OS=Daucus carota PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 1.784e-47
Identity = 88/137 (64.23%), Postives = 107/137 (78.10%), Query Frame = 3
Query:   72 MSLIPSIFGGRRTNVFDPFSLDVWDPFDGF-LSSALTNAPSSARETSQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXXGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGV 479
            MS+IPS FG RR+NV +PFSLD+WDPF  + L ++   +    +ET+ FAN  IDWKETPQAHVFKADLPGL+          G++LQISGER+KE+EEKN+KWHRVE SSGKFLRRFRLP+NA V++VKA MENGV
Sbjct:    1 MSIIPSFFGSRRSNVLNPFSLDIWDPFQDYPLITSSGTSSEFGKETAAFANTHIDWKETPQAHVFKADLPGLKKEEVKVEVEEGKVLQISGERNKEKEEKNNKWHRVEFSSGKFLRRFRLPENANVDEVKAGMENGV 137          

HSP 2 Score: 24.6386 bits (52), Expect = 1.784e-47
Identity = 11/13 (84.62%), Postives = 11/13 (84.62%), Query Frame = 1
Query:  481 LTVTVPKQEEKKP 519
            LTVTVPK E KKP
Sbjct:  138 LTVTVPKVEMKKP 150          

HSP 3 Score: 20.7866 bits (42), Expect = 1.784e-47
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 2
Query:  512 RNPEVKAIEISG 547
            + PEVK+I ISG
Sbjct:  148 KKPEVKSIHISG 159          
The following BLAST results are available for this feature:
BLAST of GO241483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
HSP17_ARATH5.022e-5472.0617.4 kDa class I heat shock protein OS=Arabidopsis... [more]
HS181_ARATH3.212e-5372.4618.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS17C_ARATH1.577e-5273.7217.6 kDa class I heat shock protein 3 OS=Arabidops... [more]
HSP11_DAUCA5.112e-5169.1217.8 kDa class I heat shock protein OS=Daucus caro... [more]
HSP16_SOYBN1.464e-5067.3818.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP13_SOYBN1.205e-4967.8817.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP11_SOYBN2.833e-4867.1517.3 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_MEDSA2.863e-4866.1818.2 kDa class I heat shock protein OS=Medicago sa... [more]
HSP14_SOYBN1.056e-4764.4917.5 kDa class I heat shock protein OS=Glycine max... [more]
HSP12_DAUCA1.784e-4764.2318.0 kDa class I heat shock protein OS=Daucus caro... [more]

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Properties
Property NameValue
Genbank description131 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 228 5, mRNA sequence.