GO241481

Overview
NameGO241481
Unique NameGO241481
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB51_ARATH (Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN=At5g53560 PE=2 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 8.408e-50
Identity = 92/134 (68.66%), Postives = 106/134 (79.10%), Query Frame = 3
Query:  102 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKKE 503
            M+SD K+  FEEV+ HNKTKDCWLIISGKVYDV+ FMDDHPGGDEVL+S+TGKDATNDFEDVGHSD+AR+MMDKY+IG+ID S+VP  R Y+  +QPAYNQDKTPEF                A VVRHYTKK+
Sbjct:    1 MSSDRKVLSFEEVSKHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMDKYFIGEIDSSSVPATRTYVAPQQPAYNQDKTPEFIIKILQFLVPILILGLALVVRHYTKKD 134          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.450e-49
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 3
Query:  102 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKKE 503
            MAS+ K+  FEEV+ HNKTKDCWLIISGKVYDV+ FMDDHPGGDEVL+S+TGKDATNDFEDVGHSD+AR+MM+KYYIG+ID STVP  R Y+   QPAYNQDKTPEF                A VVR YTKKE
Sbjct:    1 MASEKKVLGFEEVSQHNKTKDCWLIISGKVYDVTPFMDDHPGGDEVLLSSTGKDATNDFEDVGHSDTARDMMEKYYIGEIDSSTVPATRTYVAPVQPAYNQDKTPEFMIKILQFLVPILILGLALVVRQYTKKE 134          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.101e-41
Identity = 78/133 (58.65%), Postives = 93/133 (69.92%), Query Frame = 3
Query:  102 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKK 500
            M  + K+    EV+ HN  KDCWL+ISGKVYDV+ F+DDHPGGDEVL+SATGKDAT+DFEDVGHS SAR M+D+YY+GDID +T+P K  Y P  QP YNQDKT EF                AF +R YTK+
Sbjct:    1 MGGETKVFTLAEVSQHNNAKDCWLVISGKVYDVTKFLDDHPGGDEVLLSATGKDATDDFEDVGHSSSARAMLDEYYVGDIDSATIPTKTKYTPPNQPHYNQDKTSEFVVKLLQFLVPLIILGVAFGIRFYTKQ 133          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5_ORYSJ (Cytochrome b5 OS=Oryza sativa subsp. japonica GN=Os05g0108800 PE=2 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 5.463e-41
Identity = 76/129 (58.91%), Postives = 93/129 (72.09%), Query Frame = 3
Query:  117 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKKE 503
            K++  EEVA HN   DCWLII GKVY+VS F++DHPGGD+VL+S+TGKDAT+DFEDVGHS +AR MMD+YY+GDID ST+P +  Y+P +QP YNQDKTPEF                A  +R YTK E
Sbjct:    7 KVYTLEEVAKHNSKDDCWLIIGGKVYNVSKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSTTARAMMDEYYVGDIDTSTIPARTKYVPPKQPHYNQDKTPEFIIKILQFLVPLAILGLAVAIRIYTKSE 135          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 1.757e-39
Identity = 76/133 (57.14%), Postives = 91/133 (68.42%), Query Frame = 3
Query:  102 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKK 500
            M    K+    EV+ HN  KDCWLIISGKVY+V+ F++DHPGG EVL+SATGKDAT+DFED+GHS SAR M+D+YY+GDID ST+P K  Y P +QP YNQDKT EF                AF V  YTK+
Sbjct:    1 MGGQSKVFTLAEVSNHNNAKDCWLIISGKVYNVTKFLEDHPGGGEVLLSATGKDATDDFEDIGHSSSARAMLDEYYVGDIDSSTIPTKVKYTPPKQPHYNQDKTTEFIVKLLQFLVPLIILGVAFGVHFYTKQ 133          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB52_ARATH (Probable cytochrome b5 isoform 2 OS=Arabidopsis thaliana GN=At2g32720 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.295e-39
Identity = 72/132 (54.55%), Postives = 96/132 (72.73%), Query Frame = 3
Query:  102 MASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTK 497
            M  + KI    EV+ HN+  DCW++I+GKVY+V+ F++DHPGGD+VL+S+TGKDAT+DFEDVGHS+SAREMM++YY+G+IDP+T+P+K  Y P +QP YNQDKT EF                A  +R YTK
Sbjct:    1 MGDEAKIFTLSEVSEHNQAHDCWIVINGKVYNVTKFLEDHPGGDDVLLSSTGKDATDDFEDVGHSESAREMMEQYYVGEIDPTTIPKKVKYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVGIRIYTK 132          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5_BOROF (Cytochrome b5 OS=Borago officinalis PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 7.383e-38
Identity = 72/127 (56.69%), Postives = 90/127 (70.87%), Query Frame = 3
Query:  117 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTK 497
            KI    EVA HN +KDCWLII+GKVYDV+ F++DHPGGD+VL+SATGKDAT+DFED+GHS SA+ M+D+YY+GDID S++P +  Y P +QP YN DKT EF                A  +R YTK
Sbjct:    3 KIFTLAEVAQHNNSKDCWLIINGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDIGHSSSAKAMLDEYYVGDIDSSSIPSQVKYTPPKQPLYNPDKTREFVIKLLQFLVPLVILAGAIGIRFYTK 129          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5_CUSRE (Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.179e-35
Identity = 67/128 (52.34%), Postives = 88/128 (68.75%), Query Frame = 3
Query:  117 KIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRKRAYIPLEQPAYNQDKTPEFXXXXXXXXXXXXXXXXAFVVRHYTKK 500
            K++   EV+ H++  DCWL+I GKVYDV+ F+DDHPGG +VL+S+T KDAT+DFED+GHS SAR MMD+  +GDID ST+P K +Y P +QP YNQDKTP+F                A  +R Y K+
Sbjct:    5 KVYSLAEVSEHSQPNDCWLVIGGKVYDVTKFLDDHPGGADVLLSSTAKDATDDFEDIGHSSSARAMMDEMCVGDIDSSTIPTKTSYTPPKQPLYNQDKTPQFIIKLLQFLVPLIILGVAVGIRFYKKQ 132          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5B_PONAB (Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 44/85 (51.76%), Postives = 62/85 (72.94%), Query Frame = 3
Query:   96 EQMASDPKIHQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPS 350
            +++ +    ++ EEVA  N  K+ WL+I G+VYDV+ F+++HPGG+EVL+   G DA+  FEDVGHS  AREM+ +YYIGDI PS
Sbjct:   14 QEVETSVTYYRMEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIHPS 98          
BLAST of GO241481 vs. ExPASy Swiss-Prot
Match: CYB5B_MOUSE (Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.265e-21
Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 3
Query:  108 SDPKI--HQFEEVATHNKTKDCWLIISGKVYDVSSFMDDHPGGDEVLISATGKDATNDFEDVGHSDSAREMMDKYYIGDIDPSTVPRK 365
            S+P +  ++ EEVA  N  ++ W++I G+VYD++ F+ +HPGG+EVL+   G DAT  FEDVGHS  AREM+ +YYIGD+ PS +  K
Sbjct:   16 SEPSVTYYRLEEVAKRNSAEETWMVIHGRVYDITRFLSEHPGGEEVLLEQAGADATESFEDVGHSPDAREMLKQYYIGDVHPSDLKPK 103          
The following BLAST results are available for this feature:
BLAST of GO241481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
CYB51_ARATH8.408e-5068.66Cytochrome b5 isoform 1 OS=Arabidopsis thaliana GN... [more]
CYB5_BRAOB5.450e-4969.40Cytochrome b5 OS=Brassica oleracea var. botrytis G... [more]
CYB5_TOBAC1.101e-4158.65Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1[more]
CYB5_ORYSJ5.463e-4158.91Cytochrome b5 OS=Oryza sativa subsp. japonica GN=O... [more]
CYB5S_TOBAC1.757e-3957.14Cytochrome b5, seed isoform OS=Nicotiana tabacum P... [more]
CYB52_ARATH2.295e-3954.55Probable cytochrome b5 isoform 2 OS=Arabidopsis th... [more]
CYB5_BOROF7.383e-3856.69Cytochrome b5 OS=Borago officinalis PE=2 SV=1[more]
CYB5_CUSRE1.179e-3552.34Cytochrome b5 OS=Cuscuta reflexa PE=2 SV=1[more]
CYB5B_PONAB1.265e-2151.76Cytochrome b5 type B OS=Pongo abelii GN=CYB5B PE=2... [more]
CYB5B_MOUSE1.265e-2150.00Cytochrome b5 type B OS=Mus musculus GN=Cyb5b PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank description129 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 225 5, mRNA sequence.