GO241470

Overview
NameGO241470
Unique NameGO241470
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13724 contig Csv1_Contig13724:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_DANRE (Vacuolar protein sorting-associated protein 29 OS=Danio rerio GN=vps29 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.015e-55
Identity = 87/125 (69.60%), Postives = 107/125 (85.60%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHTH+F A+++E
Sbjct:    1 MLVLVLGDLHIPHRCNTLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTHKFEAFENE 125          

HSP 2 Score: 40.0466 bits (92), Expect = 1.015e-55
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA+S++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYSALESNITPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_RAT (Vacuolar protein sorting-associated protein 29 OS=Rattus norvegicus GN=Vps29 PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.726e-55
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDESLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.726e-55
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_PONAB (Vacuolar protein sorting-associated protein 29 OS=Pongo abelii GN=VPS29 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.726e-55
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.726e-55
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALEANIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_MOUSE (Vacuolar protein sorting-associated protein 29 OS=Mus musculus GN=Vps29 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.726e-55
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.726e-55
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_HUMAN (Vacuolar protein sorting-associated protein 29 OS=Homo sapiens GN=VPS29 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.726e-55
Identity = 87/125 (69.60%), Postives = 106/125 (84.80%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.726e-55
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALETNIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_BOVIN (Vacuolar protein sorting-associated protein 29 OS=Bos taurus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.249e-55
Identity = 87/124 (70.16%), Postives = 105/124 (84.68%), Query Frame = 1
Query:   94 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE +DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESYDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 129          

HSP 2 Score: 37.7354 bits (86), Expect = 2.249e-55
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  134 INPGSATGAYNALETNIIPSFVLMDIQASTV 164          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_CHICK (Vacuolar protein sorting-associated protein 29 OS=Gallus gallus GN=VPS29 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 6.496e-55
Identity = 85/124 (68.55%), Postives = 105/124 (84.68%), Query Frame = 1
Query:   94 LVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC K+ +DYLK +  D+H++RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQ DVDIL++GHTH+F A++HE
Sbjct:    6 LVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKDTYDYLKTLAGDVHVVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQFDVDILISGHTHKFEAFEHE 129          

HSP 2 Score: 36.965 bits (84), Expect = 6.496e-55
Identity = 17/31 (54.84%), Postives = 22/31 (70.97%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA+ ++  ++ PS VLMDI    V
Sbjct:  134 INPGSATGAYHALENNIIPSFVLMDIQASTV 164          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_XENTR (Vacuolar protein sorting-associated protein 29 OS=Xenopus tropicalis GN=vps29 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.105e-54
Identity = 87/125 (69.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.105e-54
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALENNIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_XENLA (Vacuolar protein sorting-associated protein 29 OS=Xenopus laevis GN=vps29 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.105e-54
Identity = 87/125 (69.60%), Postives = 105/125 (84.00%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHE 465
            +LVL LGDLHIPHR   LPAKFK +LVPGKIQHI+CTGNLC KE  DYLK +  D+HI+RG++DE   YPE K +T+GQFK+GL HGHQVIPWGD+ SLA+LQRQLDVDIL++GHT +F A++HE
Sbjct:    1 MLVLVLGDLHIPHRCNSLPAKFKKLLVPGKIQHILCTGNLCTKESFDYLKTLAGDVHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALLQRQLDVDILISGHTQKFEAFEHE 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.105e-54
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDIDGLRV 571
            INPGSATGA++++  ++ PS VLMDI    V
Sbjct:  130 INPGSATGAYNALENNIIPSFVLMDIQASTV 160          
BLAST of GO241470 vs. ExPASy Swiss-Prot
Match: VPS29_DICDI (Vacuolar protein sorting-associated protein 29 OS=Dictyostelium discoideum GN=vps29 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.419e-51
Identity = 74/126 (58.73%), Postives = 101/126 (80.16%), Query Frame = 1
Query:   91 VLVLALGDLHIPHRAADLPAKFKSMLVPGKIQHIVCTGNLCIKEVHDYLKIICPDLHIIRGEYDEETRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDVDILVTGHTHQFTAYKHEG 468
            + ++A+GD+H+PHR+  +P +FK +LVP KIQHI+CTGNL  KE+HDY K++  D+HI+RG+ DE T YP+TK ++IGQFK GLCHGHQ++PWGD  SLA LQRQLDVD+L++GHTH    ++  G
Sbjct:    1 MFIIAIGDVHVPHRSYGIPPEFKKLLVPEKIQHILCTGNLVSKEIHDYFKVLTSDVHIVRGDLDENTSYPDTKIVSIGQFKFGLCHGHQIVPWGDRASLAALQRQLDVDVLISGHTHVLEVFESNG 126          

HSP 2 Score: 42.743 bits (99), Expect = 1.419e-51
Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 2
Query:  479 INPGSATGAFSSITYDVNPSLVLMDI 556
            +NPGSATGAFS+I+ DV PS VLMD+
Sbjct:  130 VNPGSATGAFSNISNDVIPSFVLMDV 155          
The following BLAST results are available for this feature:
BLAST of GO241470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
VPS29_DANRE1.015e-5569.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_RAT1.726e-5569.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_PONAB1.726e-5569.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_MOUSE1.726e-5569.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_HUMAN1.726e-5569.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_BOVIN2.249e-5570.16Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_CHICK6.496e-5568.55Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENTR1.105e-5469.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_XENLA1.105e-5469.60Vacuolar protein sorting-associated protein 29 OS=... [more]
VPS29_DICDI1.419e-5158.73Vacuolar protein sorting-associated protein 29 OS=... [more]

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Properties
Property NameValue
Genbank description118 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 207 5, mRNA sequence.