GO241463

Overview
NameGO241463
Unique NameGO241463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 6.189e-118
Identity = 208/237 (87.76%), Postives = 218/237 (91.98%), Query Frame = -3
Query:    3 DALXLLGSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 713
            D L    SGA V+IDD T KDL+RPYGRVNRK LKSKM+QKCI NGVKFHQAKVIKVIHEESKS+LICNDG+TIQA VVLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN ELKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ M DIQERMVARL HLGIKV+ IEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA
Sbjct:  136 DCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKCILNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNVELKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLGMDDIQERMVARLSHLGIKVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 372          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 1.379e-117
Identity = 206/237 (86.92%), Postives = 219/237 (92.41%), Query Frame = -3
Query:    3 DALXLLGSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 713
            D L    SGA V+IDDNT KDL RPYGRVNRK LKSKM+QKCI NGVKFHQAKVIKVIHEESKS+LICNDG+TIQA VVLDATGFSR LVQYDKPYNPGYQVAYGILAEVEEHPFD++KMVFMDWRDSHL NN++LKE NS+IPTFLYAMPFSSNRIFLEETSLVARPG+ + DIQERMVARL HLGIKV+ IEEDEHC+IPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA
Sbjct:  138 DCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKCIMNGVKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFSRSLVQYDKPYNPGYQVAYGILAEVEEHPFDVNKMVFMDWRDSHLKNNTDLKERNSRIPTFLYAMPFSSNRIFLEETSLVARPGLRIDDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 374          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 3.755e-115
Identity = 202/237 (85.23%), Postives = 212/237 (89.45%), Query Frame = -3
Query:    3 DALXLLGSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 713
            D L    SG VV+IDDNT KDLDRPYGRVNRK LKSKM+QKCI NGVKFH AKVIKVIHEE+KS+LICNDGVTIQA VVLDATGFSRCLVQYDKPY PGYQVAYGILAEVEEHPFD  KMV MDWRDSHL NN ELKE N K+PTFLYAMPFSSN+IFLEETSLVARPG+ M DIQERMVARL HLGIKV+ IEEDEHCVIPMGG LPV+PQRVVG GGTAG+VHPSTGYMVARTLA
Sbjct:  138 DCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKCILNGVKFHHAKVIKVIHEEAKSMLICNDGVTIQATVVLDATGFSRCLVQYDKPYKPGYQVAYGILAEVEEHPFDTSKMVLMDWRDSHLGNNMELKERNRKVPTFLYAMPFSSNKIFLEETSLVARPGLRMDDIQERMVARLNHLGIKVKSIEEDEHCVIPMGGSLPVIPQRVVGTGGTAGLVHPSTGYMVARTLA 374          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1)

HSP 1 Score: 402.905 bits (1034), Expect = 8.657e-112
Identity = 195/237 (82.28%), Postives = 213/237 (89.87%), Query Frame = -3
Query:    3 DALXLLGSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 713
            D L    SGAVV++D+  KKDL RPYGRVNRK LKSKMLQKCITNGVKFHQ+KV  V+HEE+ S ++C+DGV IQA+VVLDATGFSRCLVQYDKPYNPGYQVAYGI+AEV+ HPFD+DKMVFMDWRD HL++  ELKE NSKIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERM ARLKHLGI V+ IEEDE CVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA
Sbjct:  137 DCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKCITNGVKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRCLVQYDKPYNPGYQVAYGIVAEVDGHPFDVDKMVFMDWRDKHLDSYPELKERNSKIPTFLYAMPFSSNRIFLEETSLVARPGLRMEDIQERMAARLKHLGINVKRIEEDERCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 373          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1)

HSP 1 Score: 401.749 bits (1031), Expect = 1.929e-111
Identity = 191/237 (80.59%), Postives = 213/237 (89.87%), Query Frame = -3
Query:    3 DALXLLGSGAVVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 713
            D L    SGA+V++DD + K+L RPY RVNRK LKSKM++KC++NGV+FHQA V+K +HEE KS LIC+DGVTI A VVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFD+DKMVFMDWRDSHLN  +EL E N+KIPTFLYAMPFSSNRIFLEETSLVARPG+ M+DIQERMVARL HLGI+++ IEEDE CVIPMGGPLPV+PQRVVGIGGTAGMVHPSTGYMVARTLA
Sbjct:  141 DCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMMKKCVSNGVRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDVDKMVFMDWRDSHLNGKAELNERNAKIPTFLYAMPFSSNRIFLEETSLVARPGLKMEDIQERMVARLNHLGIRIKSIEEDERCVIPMGGPLPVIPQRVVGIGGTAGMVHPSTGYMVARTLA 377          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 3.428e-84
Identity = 141/226 (62.39%), Postives = 188/226 (83.19%), Query Frame = -3
Query:    3 VHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 680
            V I+D+  K LDRPYGRV+R +LK+K+L+ C++NGVKFH+AKV  V H+E +S ++C+DG  I+A++++DA+GF+   V+YDKP N GYQ+A+GILAEVE HPFDLDKMV MDWRDSHL N   L+ +N K+PTFLYAMPF SN +FLEETSLV+RP +  K+++ RM ARL+H+GI+V+ + EDE C+IPMGGPLPV+PQ V+ IGGT+G++HP+TGYMVART+A
Sbjct:  152 VFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEYDKPRNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKSRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGGTSGLIHPATGYMVARTMA 377          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 5.122e-80
Identity = 139/226 (61.50%), Postives = 180/226 (79.65%), Query Frame = -3
Query:    3 VHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 680
            VHI D+  K LDRPYGRV+RK LK K+L  C+ N VKF++AKV+KV HEE +S ++C+DG  I  ++++DA+G++   ++YDKP N GYQVA+GILAEV+ HPFDLDKM+ MDWRDSHL N   L+  N+K PTFLYAMPF  N +FLEETSLV+RP +   +++ RMVARL+HLGIKVR + E+E CVI MGGPLP +PQ V+ IGGT+G+VHPS+GYMVAR++A
Sbjct:  147 VHISDHKTKYLDRPYGRVSRKKLKLKLLNSCVENRVKFYKAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYASDFIEYDKPRNHGYQVAHGILAEVDNHPFDLDKMMLMDWRDSHLGNEPYLRVKNTKEPTFLYAMPFDRNLVFLEETSLVSRPMLSYMEVKRRMVARLRHLGIKVRSVLEEEKCVITMGGPLPRIPQNVMAIGGTSGIVHPSSGYMVARSMA 372          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 1.946e-79
Identity = 138/226 (61.06%), Postives = 179/226 (79.20%), Query Frame = -3
Query:    3 VHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEESKSLLICNDGVTIQAAVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 680
            VHI+D+  K L RPYGRV+RK LK ++L  C+ N VKF++AKV KV HEE +S ++C+DG  I+ ++V+DA+GF+   ++YDKP N GYQ+A+G+L EV+ HPFDLDKMV MDWRDSHL N   L+  N+K PTFLYAMPF  N +FLEETSLV+RP +   +++ RMVARL+HLGIKVR + E+E CVIPMGGPLP +PQ V+ IGG +G+VHPSTGYMVAR++A
Sbjct:  147 VHINDHKTKYLGRPYGRVSRKKLKLRLLNSCVENRVKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDASGFASDFIEYDKPRNHGYQIAHGVLVEVDNHPFDLDKMVLMDWRDSHLGNEPYLRVNNAKEPTFLYAMPFDRNLVFLEETSLVSRPVLSYMEVKRRMVARLRHLGIKVRSVIEEEKCVIPMGGPLPRIPQNVMAIGGNSGIVHPSTGYMVARSMA 372          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 89/230 (38.70%), Postives = 141/230 (61.30%), Query Frame = -3
Query:    3 VVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIHEES-KSLLICNDGVTIQAAVVLDATGF-SRCLVQYDKPY-NPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 683
            +V++DD+    + R YGRV+R  L  ++L++C+  GV +  +KV +++   + +SL+ C   V I    V  A+G  S   +QY+        Q AYG+  EV+ +PFD   MVFMD+RD +L ++++  EA  K PTFLYAMP S  R+F EET L ++  +P   ++++++ RL  LG++++ I E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+
Sbjct:  168 IVYLDDDEPILIGRAYGRVSRHFLHEELLKRCVEAGVLYLNSKVDRIVEATNGQSLVECEGDVVIPCRFVTVASGAASGKFLQYELGSPRVSVQTAYGVEVEVDNNPFDPSLMVFMDYRD-YLRHDAQSLEA--KYPTFLYAMPMSPTRVFFEETCLASKDAMPFDLLKKKLMLRLNTLGVRIKEIYEEEWSYIPVGGSLPNTEQKTLAFGAAASMVHPATGYSVVRSLS 394          
BLAST of GO241463 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 86/230 (37.39%), Postives = 138/230 (60.00%), Query Frame = -3
Query:    3 VVHIDDNTKKDLDRPYGRVNRKLLKSKMLQKCITNGVKFHQAKVIKVIH-EESKSLLICNDGVTIQAAVVLDATGF-SRCLVQYDKPY-NPGYQVAYGILAEVEEHPFDLDKMVFMDWRDSHLNNNSELKEANSKIPTFLYAMPFSSNRIFLEETSLVARPGVPMKDIQERMVARLKHLGIKVRGIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLA 683
            +V++DD+    + R YGRV+R+LL  ++L++C+ +GV +  +KV  +    +   L+ C+D   I   +   A+G  S  L+QY+        Q AYG+  EVE  P+D D+MVFMD+RD     N +++   ++ PTFLYAMP + +R+F EET L ++  +P   ++ +++ RL  LGI++    E+E   IP+GG LP   Q+ +  G  A MVHP+TGY V R+L+
Sbjct:  171 IVYLDDDKPITIGRAYGRVSRRLLHEELLRRCVESGVSYLSSKVDSITEASDGLRLVACDDNNVIPCRLATVASGAASGKLLQYEVGGPRVCVQTAYGVEVEVENSPYDPDQMVFMDYRDY---TNEKVRSLEAEYPTFLYAMPMTKSRLFFEETCLASKDVMPFDLLKTKLMLRLDTLGIRILKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLS 397          
The following BLAST results are available for this feature:
BLAST of GO241463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
LCYB_CAPAN6.189e-11887.76Lycopene beta cyclase, chloroplastic/chromoplastic... [more]
LCYB_SOLLC1.379e-11786.92Lycopene beta cyclase, chloroplastic OS=Solanum ly... [more]
LCYB_TOBAC3.755e-11585.23Lycopene beta cyclase, chloroplastic OS=Nicotiana ... [more]
LCYB_ARATH8.657e-11282.28Lycopene beta cyclase, chloroplastic OS=Arabidopsi... [more]
LCYB_NARPS1.929e-11180.59Lycopene beta cyclase, chloroplastic/chromoplastic... [more]
CCS_CITSI3.428e-8462.39Capsanthin/capsorubin synthase, chromoplast OS=Cit... [more]
CCS_CAPAN5.122e-8061.50Capsanthin/capsorubin synthase, chromoplast OS=Cap... [more]
NXS_SOLTU1.946e-7961.06Neoxanthin synthase, chloroplastic OS=Solanum tube... [more]
LCYE_SOLLC1.667e-3838.70Lycopene epsilon cyclase, chloroplastic OS=Solanum... [more]
LCYE_ARATH1.081e-3737.39Lycopene epsilon cyclase, chloroplastic OS=Arabido... [more]

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Properties
Property NameValue
Genbank description111 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone b6 5, mRNA sequence.