GO241462

Overview
NameGO241462
Unique NameGO241462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241462 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.443e-23
Identity = 62/131 (47.33%), Postives = 70/131 (53.44%), Query Frame = 2
Query:   44 GLXRXLITRPXXGQL*KSPSXRKXDAVIPXATGIPWSTFEPNLGTNGKVIDITXXP*CDADFCXXXXXXXXXXXXXXXXXXXRENLDFXXXXXXXXXXXXXINSKHPLSKAEDAWAESIDGHATGKIIVEP 436
            G    L  +   G   KSPS +K DAV+  A GIP+S FEPNL  NGKVIDIT  P     +                     ENL+F             I+SKHPLSKAEDAWA+SIDGHATGKIIVEP
Sbjct:  199 GADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSKHPLSKAEDAWAKSIDGHATGKIIVEP 329          
BLAST of GO241462 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 5.863e-22
Identity = 49/114 (42.98%), Postives = 59/114 (51.75%), Query Frame = 2
Query:   95 SPSXRKXDAVIPXATGIPWSTFEPNLGTNGKVIDITXXP*CDADFCXXXXXXXXXXXXXXXXXXXRENLDFXXXXXXXXXXXXXINSKHPLSKAEDAWAESIDGHATGKIIVEP 436
            SPS +K D V+  A+GIPWSTFEPNL   GKVID+T  P     F                      N ++             I+SKHPLSK EDAW+  + GHATGKII+EP
Sbjct:  216 SPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSKHPLSKGEDAWSRIMGGHATGKIIIEP 329          

HSP 2 Score: 32.7278 bits (73), Expect = 5.863e-22
Identity = 15/26 (57.69%), Postives = 17/26 (65.38%), Query Frame = 1
Query:   10 GARXXEXXKSLGAXXVXDYKTPXGAA 87
            GAR  +  K LGA  V DYKTP GA+
Sbjct:  188 GARNLDFVKGLGADEVLDYKTPEGAS 213          
The following BLAST results are available for this feature:
BLAST of GO241462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
QORH_ARATH4.443e-2347.33Putative quinone-oxidoreductase homolog, chloropla... [more]
QORH_SPIOL5.863e-2242.98Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
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Properties
Property NameValue
Genbank description110 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 196 5, mRNA sequence.