GO241457

Overview
NameGO241457
Unique NameGO241457
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1708 contig Csv1_Contig1708:26..614. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 4.867e-61
Identity = 120/166 (72.29%), Postives = 140/166 (84.34%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWNSNISMNMLDKHWH-----WIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAG 531
            MVKGPGLYS+IGKKARDLLY+DY SDHKFTVTTY++ GVAIT+SG+KKGELFLADVSTQLKNKNITTDVKVDTNSN++TTITVDEPAPGLK+IFSF+VPDQ+S +    + +  L ++        +  +P+VNFSG     N+VALGTDLSFDTATGNFTKCNAG
Sbjct:    1 MVKGPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGK----VELQYLHEYAGINTSIGLTASPLVNFSGVA-GNNTVALGTDLSFDTATGNFTKCNAG 161          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 5.569e-57
Identity = 115/166 (69.28%), Postives = 133/166 (80.12%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWNSNISMNMLDKHWH-----WIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAG 531
            M KGPGLY+EIGKKARDLLYKDYQSDHKF++TTY+  GV ITSSG KKG+LFLADV+TQLKNKN+TTD+KVDTNSNLFTTITVDE APGLK+I SF VPDQRS +    + +  L  +        +  NPIVNFSG  + TN +ALGTD+SFDT TG+FTKCNAG
Sbjct:    1 MGKGPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGK----LEVQYLHDYAGICTSVGLTANPIVNFSGV-VGTNIIALGTDVSFDTKTGDFTKCNAG 161          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 3.496e-51
Identity = 105/165 (63.64%), Postives = 126/165 (76.36%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWNSNISMNMLDKHWH-----WIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNA 528
            MVKGPGLY++IGKKARDLLYKDY SD KFT++TY+  GVAITSSG KKGELFL DV+TQLKNKNITTD+KVDTNSNLFTTITV+EPAPG+K+I SF VP+Q S +    + +  L ++        +  NPIVNFS   + TN++A G D+SFDT  G  TK NA
Sbjct:    1 MVKGPGLYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGK----VELQYLHEYAGISSSVGLKANPIVNFSSV-IGTNALAFGADISFDTKLGELTKSNA 160          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.195e-45
Identity = 99/168 (58.93%), Postives = 122/168 (72.62%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWN-------SNISMNMLDKHWHWIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAG 531
            MVKGPGLY+EIGKKARDLLYKD+ SD KF++TT++ AGVAITS+G KKG+L L DV+ Q + KNITTD+KV T+S    T TVDE APGL+SIFSF VPDQ S +         + IS +M       +  NP VNFSG  + +N +A+GTD+SFDT +GNFTK NAG
Sbjct:    1 MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSM------GLTQNPTVNFSGV-IGSNVLAVGTDVSFDTKSGNFTKINAG 161          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3)

HSP 1 Score: 176.792 bits (447), Expect = 7.061e-44
Identity = 90/159 (56.60%), Postives = 115/159 (72.33%), Query Frame = 1
Query:   58 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWNSNISMNMLDKHWH-WIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAG 531
            GPGLY EIGKKARDLLY+DYQ+DHKFT+TTYTS GVAIT++  KK +L   ++ +Q+KNKNIT DVK +++SN+ TT+TVDE  PGLKSI SF VPDQRS ++    S +         +  +P+VN S     T ++A+G D+S DTATGN TK NAG
Sbjct:    3 GPGLYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSV-FGTKALAVGADVSLDTATGNLTKYNAG 160          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3)

HSP 1 Score: 174.866 bits (442), Expect = 2.683e-43
Identity = 93/168 (55.36%), Postives = 118/168 (70.24%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDEPAPGLKSIFSFIVPDQRSARWN-------SNISMNMLDKHWHWIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAG 531
            MVKGPGLY+EIGKKARDLLY+DYQ D KF+VTTY+S GVAIT++G  KG LFL DV+TQ+KN N T DVKV T+S+L TT+T DEPAPGLK I    +PD +S +         + IS ++           PIVNFSG  + TN ++LGTD++++T +GNF   NAG
Sbjct:    1 MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSV------GFTATPIVNFSGV-VGTNGLSLGTDVAYNTESGNFKHFNAG 161          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.059e-40
Identity = 85/163 (52.15%), Postives = 115/163 (70.55%), Query Frame = 1
Query:   58 GPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSARWNSNISMNMLDKHWH-----WIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNA 528
            GPGLYS IGKKA+DLLY+DYQ+DHKFT+TTYT+ G AIT++  KK +L + ++ +Q+KNKNIT DVK ++ SN+ TTIT D+  APGLK+I SF VPDQ+S +    + +  L  +        +  NP+VN SG    T+++A+G D+S DTAT NF K NA
Sbjct:    3 GPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGK----VELQYLHDYAGINASIGLTANPVVNLSG-AFGTSALAVGADVSLDTATKNFAKYNA 160          

HSP 2 Score: 26.5646 bits (57), Expect = 2.059e-40
Identity = 12/16 (75.00%), Postives = 14/16 (87.50%), Query Frame = 2
Query:  533 LSYTHTDLIASLTLND 580
            LSYT+ DLIASL LN+
Sbjct:  162 LSYTNQDLIASLNLNN 177          
BLAST of GO241457 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.484e-34
Identity = 81/176 (46.02%), Postives = 111/176 (63.07%), Query Frame = 1
Query:   49 MVKGPGLYSEIGKKARDLLYKDYQSDHKFTVTTYTSAGVAITSSGVKKGELFLADVSTQLKNKNITTDVKVDTNSNLFTTITVDE-PAPGLKSIFSFIVPDQRSARW-----------NSNISMNMLDKHWHWIHCNPIVNFSGXGLETNSVALGTDLSFDTATGNFTKCNAGAEL 540
            MV   GLY++IGKK RDLLYKDY +  KF +TT +  GVAIT++G +K E    ++ TQ+KNK +T DVK ++ S+L TTITVDE   PGLKSI + +VPDQRS +            N+++ +N           NP+VN SG    + ++++G D+SFDTAT +FTK NA   L
Sbjct:    1 MVVAVGLYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLN----------SNPMVNLSG-AFGSKALSVGVDVSFDTATSDFTKYNAALSL 165          

HSP 2 Score: 21.9422 bits (45), Expect = 1.484e-34
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  533 LSYTHTDLIASLTLND 580
            LS T  DLIASL LN+
Sbjct:  163 LSLTSPDLIASLHLNN 178          
The following BLAST results are available for this feature:
BLAST of GO241457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VDAC2_SOLTU4.867e-6172.29Mitochondrial outer membrane protein porin of 36 k... [more]
VDAC1_SOLTU5.569e-5769.28Mitochondrial outer membrane protein porin of 34 k... [more]
VDAC_PEA3.496e-5163.64Outer plastidial membrane protein porin OS=Pisum s... [more]
VDAC1_ARATH2.195e-4558.93Mitochondrial outer membrane protein porin 1 OS=Ar... [more]
VDAC1_ORYSJ7.061e-4456.60Mitochondrial outer membrane protein porin OS=Oryz... [more]
VDAC2_ARATH2.683e-4355.36Mitochondrial outer membrane protein porin 2 OS=Ar... [more]
VDAC1_WHEAT2.059e-4052.15Mitochondrial outer membrane porin OS=Triticum aes... [more]
VDAC_MAIZE1.484e-3446.02Outer plastidial membrane protein porin OS=Zea may... [more]
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Properties
Property NameValue
Genbank description105 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 191 5, mRNA sequence.