GO241397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 4.121e-53 Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 3 Query: 114 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 V DPLYPGGSFDPLGLADD EAFAELKVKEIKNGRLAMFSMFGFFVQAIV GKGPL NLAD LADPVNNNAWA+A NFVPGK Sbjct: 183 VVDPLYPGGSFDPLGLADDAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 HSP 2 Score: 72.7886 bits (177), Expect = 4.121e-53 Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNPSL+HAQS LA WACQVVLMG VEGY +AGGPLGE P+ P Sbjct: 146 GNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVVDPLYP 189
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 3.439e-52 Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 3 Query: 114 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 VTDP+YPGGSFDPL LADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV GKGPL NLAD LA+PVNNNAWAYA NFVPGK Sbjct: 164 VTDPIYPGGSFDPLALADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNFVPGK 245 HSP 2 Score: 67.781 bits (164), Expect = 3.439e-52 Identity = 33/44 (75.00%), Postives = 34/44 (77.27%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GN SLIHAQS LA WA QV+LMG VEGY IAGGPLGE PI P Sbjct: 127 GNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYP 170
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 2.198e-51 Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 3 Query: 114 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 VTDP+YPGGSFDPLGLADDPEA AELKVKE+KNGRLAMFSMFGFFVQAIV GKGPL NLAD LADPVNNNAWAYA PGK Sbjct: 175 VTDPIYPGGSFDPLGLADDPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKLCPGK 256 HSP 2 Score: 70.8626 bits (172), Expect = 2.198e-51 Identity = 34/44 (77.27%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNPSLIHAQS LA WA QV+LMG VEGY IAGGPLGE PI P Sbjct: 138 GNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYP 181
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB23_APIGR (Chlorophyll a-b binding protein, chloroplastic OS=Apium graveolens GN=LHC0 PE=1 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 4.056e-50 Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 3 Query: 114 VTDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 + DPLYPGGSFDPLGLA+DPE AELKVKE+KNGRLAMFSMFGFFVQAIV GKGPL NLAD LADPVNNNAWA+A NFVPGK Sbjct: 183 IVDPLYPGGSFDPLGLAEDPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 264 HSP 2 Score: 67.3958 bits (163), Expect = 4.056e-50 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNPSL+HAQS L+ WA QV+LMG VEGY +AGGPLGE P+ P Sbjct: 146 GNPSLVHAQSILSIWATQVILMGAVEGYRVAGGPLGEIVDPLYP 189
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.448e-49 Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 DPLYPG +FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIV GKGP+ NL D LADPV NNAWAYA NFVPGK Sbjct: 71 DPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150 HSP 2 Score: 69.707 bits (169), Expect = 4.448e-49 Identity = 31/44 (70.45%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNP+LIHAQS LA WACQVVLMG +EGY + GGPLGE P+ P Sbjct: 32 GNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYP 75
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.159e-48 Identity = 70/80 (87.50%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 DPL PGG+FDPLGLADDPEA AELKVKEIKNGRLAMFSMFGFFVQAIV GKGP+ NL D LADPV NNAWAYA NFVPGK Sbjct: 187 DPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266 HSP 2 Score: 67.3958 bits (163), Expect = 2.159e-48 Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNP+LIHAQS LA WACQVVLMG +EGY + GG LGE P++P Sbjct: 148 GNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLP 191
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.951e-46 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIV GKGP+ NL D +ADPV NNAWAYA NFVPGK Sbjct: 184 DKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263 HSP 2 Score: 63.5438 bits (153), Expect = 1.951e-46 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGE 112 GNP+L+HAQS LA WA QVVLMG VEGY + GGPLGE Sbjct: 145 GNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGE 181
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.951e-46 Identity = 66/80 (82.50%), Postives = 72/80 (90.00%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 D +YPGG+FDPLGLADDP+ FAELKVKE+KNGRLAMFSMFGFFVQAIV GKGP+ NL D +ADPV NNAWAYA NFVPGK Sbjct: 184 DKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263 HSP 2 Score: 63.5438 bits (153), Expect = 1.951e-46 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGE 112 GNP+L+HAQS LA WA QVVLMG VEGY + GGPLGE Sbjct: 145 GNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGE 181
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB21_RAPSA (Chlorophyll a-b binding of LHCII type 1 protein (Fragment) OS=Raphanus sativus PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.987e-46 Identity = 70/80 (87.50%), Postives = 71/80 (88.75%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVPGK 359 D LYPGGSFDPL DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIV GKGPL NLAD LADPVNNNAWA+A NFVPGK Sbjct: 45 DLLYPGGSFDPLASLTDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 124 HSP 2 Score: 62.003 bits (149), Expect = 1.987e-46 Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAG-GPLGEXD*PIVP 133 GNPSL+HAQS LA WA QV+LMG VEGY +AG GPLGE + + P Sbjct: 5 GNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYP 49
BLAST of GO241397 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.185e-39 Identity = 59/78 (75.64%), Postives = 65/78 (83.33%), Query Frame = 3 Query: 120 DPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVXGKGPLXNLADXLADPVNNNAWAYAXNFVP 353 DPLYPG +FDPLGLADDP+ FAELKVKEIKNGRLAMF+ GFFVQAIV GKGP+ NL D LA+P NNA+AYA F P Sbjct: 195 DPLYPGEAFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKFTP 272 HSP 2 Score: 57.3806 bits (137), Expect = 1.185e-39 Identity = 28/44 (63.64%), Postives = 32/44 (72.73%), Query Frame = 2 Query: 2 GNPSLIHAQSXLAXWACQVVLMGXVEGYXIAGGPLGEXD*PIVP 133 GNPSLIHAQ+ +A A QVVLMG VEGY + GGP GE P+ P Sbjct: 156 GNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYP 199 The following BLAST results are available for this feature:
BLAST of GO241397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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