GE213477

Overview
NameGE213477
Unique NameGE213477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13721 contig Csv1_Contig13721:1..628. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.191e-63
Identity = 113/185 (61.08%), Postives = 137/185 (74.05%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G +N ST+ ++KI+E YNGF  +K LVDVGG  G +L  IT+K+  +KGINFDLPHVI  A  Y G+EH GGDMF+SVPKGDAI MKWILHDWSD HCL++LKNCYKS+PE+GKVIV E ILP+ P+T+  ++    IDV+M+  NPGGKERT+ EF  LA GAGF G        N WVMEF K
Sbjct:  170 GMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.246e-62
Identity = 109/185 (58.92%), Postives = 135/185 (72.97%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  + ST+ ++KILE Y GF+ +K LVDVGG  G  +  I +KY  +KGINFDLPHVI+ AP YPGVEH GGDMF S+PK DA+ MKWI HDWSDEHCLK LKNCY+++P++GKVIV E ILP  P++S  +K    IDV+M+  NPGGKERT+ EF  LA GAGF G +  C   N ++MEF K
Sbjct:  179 GMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.830e-62
Identity = 109/185 (58.92%), Postives = 131/185 (70.81%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  N ST+ ++KILE Y GF  +K +VDVGG  G TL  I +KY  +KGINFDLPHVI+ AP YPGVEH GGDMF SVPKGDAI MKWI HDWSDEHC+K LKNCY ++P++GKVI+ E +LP+ P+T   +K    IDV+M+  NPGGKERT+ EF  LA  AGF      C   N W+ME  K
Sbjct:  177 GMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.830e-62
Identity = 112/186 (60.22%), Postives = 139/186 (74.73%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNS-QIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  N ST++++KILE Y GF+ +K +VDVGG  G TL  I +KY  +KGINFDLPHVI+ AP YPGV+H GGDMF SVPKGDAI MKWI HDWSD HCLK LKNC++++PE+GKVI+ E +LP+ P+ STLS +N+  +DV+M+  NPGGKERT+ EF  LA GAGF G    C   N W+ME  K
Sbjct:  179 GMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPD-STLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.533e-62
Identity = 110/185 (59.46%), Postives = 136/185 (73.51%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  + ST+ ++KILE Y GF+ +  +VDVGG  G  +  I +KY  +KGINFDLPHVI+ AP+YPGV+H GGDMF SVPKGDAI MKWI HDWSDEHCLK LKNCY ++P++GKVI+ E ILP  P+TS  +K    IDV+M+  NPGGKERT+ EF  LA G+GF GIR  C   N +V+EF K
Sbjct:  179 GMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 8.533e-62
Identity = 108/185 (58.38%), Postives = 134/185 (72.43%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  + ST+ ++KILE Y GF+ +  +VDVGG  G T+  I +KY  +KGINFDL HVI+ AP YPGVEH G DMF SVPK DAI MKWI HDWSDEHCLK LKNCY+++P +GKV+V E ILP+ P+TS  +K    +D++M+  NPGGKERT+ EF  LA GAGF+G R  C     WVMEF+K
Sbjct:  175 GMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.114e-61
Identity = 108/185 (58.38%), Postives = 138/185 (74.59%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  N ST+ ++KILE Y GF+ +  LVDVGG +G TLK I +KY ++KGINFDLPHVI+ AP +PG+EH GGDMF SVPKGDAI MKWI HDWSDEHC+K LKNCY+S+PEDGKVI+ E ILP+ P++S  +K+   +D +M+  NPGGKERT+ EF  LA  +GF GI+  C    + ++E  K
Sbjct:  177 GMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.114e-61
Identity = 110/185 (59.46%), Postives = 134/185 (72.43%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  + ST+ ++KILE Y GF+ +  +VDVGG  G  L  I +KY  +KGINFDLPHVI+ AP+YPGVEH GGDMF SVPKGDAI MKWI HDWSDEHCLK LKNCY ++P++GKVI+ E ILP  P++S  +K    IDV+M+  NPGGKERT+ EF  LA GAGF G    C   N +V+EF K
Sbjct:  179 GMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.531e-61
Identity = 106/185 (57.30%), Postives = 135/185 (72.97%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  N ST+ ++KILE Y GF+ +K +VDVGG  G TL  I +KY  +KGINF+LPHV++ AP + GVEH GGDMF SVPKGDAI MKWI HDWSD+HC KLLKNCY+++P++GKVI+ E +LP+ P+TS  ++    +DV+M+  NPGGKERT+ EF  LA GAGF   R  C   N W+ME  K
Sbjct:  166 GMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVEDAPSHSGVEHVGGDMFVSVPKGDAIFMKWICHDWSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of GE213477 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.435e-61
Identity = 106/185 (57.30%), Postives = 130/185 (70.27%), Query Frame = -2
Query:   58 GRYNLSTLVIQKILEAYNGFKHIKQLVDVGGSLGNTLKAITTKYSHVKGINFDLPHVIQHAPEYPGVEHAGGDMFQSVPKGDAILMKWILHDWSDEHCLKLLKNCYKSIPEDGKVIVVESILPDLPETSTLSKRNSQIDVLMMTQNPGGKERTKHEFMTLATGAGFSGIRFECFTCNLWVMEFYK 612
            G  N ST+ ++KILE Y GF  +K +VDVGG  G TL  I +KY  +KGINFDLPHV++ AP YPGVEH GGDMF SVPKGDAI MKWI HDWSD HC+K LK CY+++PE+GKVI+ E +LP+ P+T   +K    IDV+M+  NPGGKERT+ EF  LA  +GF      C   N W+ME  K
Sbjct:  177 GMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIISKYPSIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
The following BLAST results are available for this feature:
BLAST of GE213477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
COMT1_ZINEL1.191e-6361.08Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA2.246e-6258.92Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_OCIBA3.830e-6258.92Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CATRO3.830e-6260.22Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_ROSCH8.533e-6259.46Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_CAPAN8.533e-6258.38Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
OMT1_ARATH1.114e-6158.38Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_PRUDU1.114e-6159.46Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_COFCA5.531e-6157.30Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT2_OCIBA9.435e-6157.30Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]

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Properties
Property NameValue
Genbank description358 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.