GE213468

Overview
NameGE213468
Unique NameGE213468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10835 contig Csv1_Contig10835:1576..1828. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of GE213468 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.381e-11
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = -2 
Query:   23 KYTRTLTNVGTPTTYKASVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTA-SSMPSGN 199
            KYTRT+T+VG   TY   V+S++T VKI VEP  L+F    EKKSY VTFT  SS PSG+
Sbjct:  674 KYTRTVTSVGGAGTYSVKVTSETTGVKISVEPAVLNFKEANEKKSYTVTFTVDSSKPSGS 733
The following BLAST results are available for this feature:
BLAST of GE213468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SUBL_ARATH7.381e-1158.33Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank description348 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.