GE213465
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.881e-15 Identity = 48/161 (29.81%), Postives = 87/161 (54.04%), Query Frame = -2 Query: 21 CEDPIKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIRDPNVVEESKKSSKYEY 503 C D + +N L + KQVE++F D NL D++M ++I ++++G++ I+V+ +F ++K LT + I AL+ S+++ V+ G ++RR PL T +D TV VE LP+ + ++R+F++ G + I I SK + E+ Sbjct: 22 CADLSEKKDNEKKKRSRVKQLLSDVKKQVEFWFGDVNLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTRHSKGFAFVEF 181
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_MOUSE (La-related protein 7 OS=Mus musculus GN=Larp7 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.208e-15 Identity = 44/120 (36.67%), Postives = 74/120 (61.67%), Query Frame = -2 Query: 72 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 431 I KQV+++F D NL DK++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G ++RR PL +D + TV VE LP++ + ++R+F + G + I I Sbjct: 32 IAKQVDFWFGDANLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 150
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LAH1_YEAST (La protein homolog OS=Saccharomyces cerevisiae GN=LAH1 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.472e-15 Identity = 50/152 (32.89%), Postives = 84/152 (55.26%), Query Frame = -2 Query: 69 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKL----FTVLVENLPED--------HSVENMQRIFAEAGKIKSICIR 488 + NS T ++ R +KQVE+YFS+ N P D+++ KN +G+VPIS IA+F ++K+ R ++ ALR S +L VS++G+ V+R PL +T R+ ++ T+ V N P + EN++ F + G+I + +R Sbjct: 14 QSRRNSFAVIEFTPEVLDRCLKQVEFYFSEFNFPYDRFLRTTAEKN-DGWVPISTIATFNRMKKY-RPVDKVIEALRSSEILEVSADGENVKRRVPLDLTAARNARIEQNQRTLAVMNFPHEDVEASQIPELQENLEAFFKKLGEINQVRLR 163
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_RAT (La-related protein 7 OS=Rattus norvegicus GN=Larp7 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15 Identity = 43/120 (35.83%), Postives = 74/120 (61.67%), Query Frame = -2 Query: 72 IIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 431 I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I AL+ SS++ + G ++RR PL +D + TV VE LP++ + ++R+F + G + I I Sbjct: 33 IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRIRRKKPLG-ERPKDEEERTVYVELLPKNVTHSWIERVFGKCGNVVYISI 151
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_MACFA (La-related protein 7 OS=Macaca fascicularis GN=LARP7 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15 Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = -2 Query: 72 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 491 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G ++RR PL +D TV VE LP++ + ++R+F + G + I I Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI 156
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_HUMAN (La-related protein 7 OS=Homo sapiens GN=LARP7 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.146e-15 Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = -2 Query: 72 IKDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 491 ++ + S VL D I KQV+++F D NL D+++ I K+++G+V IS++ SF K+K+LT + I ALR S+++ + G ++RR PL +D TV VE LP++ + ++R+F + G + I I Sbjct: 23 VEKKKRSRVKQVLAD-----IAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLG-ERPKDEDERTVYVELLPKNVNHSWIERVFGKCGNVVYISI 156
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP7_XENTR (La-related protein 7 OS=Xenopus tropicalis GN=larp7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.592e-14 Identity = 46/139 (33.09%), Postives = 81/139 (58.27%), Query Frame = -2 Query: 72 KDHENSSTPAVLTDDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICI 488 KD E V L I KQV+++F D NL D+++ I K ++G++ IS++ASF K+K++T + I A++ SS++ ++ +G K+RR PL + +D TV VE LP++ + ++R+F + G + + I Sbjct: 23 KDREKKKRSRV--KQLLADIAKQVDFWFGDVNLHKDRFLREQIEKTRDGYIDISLLASFNKMKKITTDSKLIARAVKNSSVVEINLSGTKIRRRFPLG-EKPQDVDSRTVYVELLPKNVTHSWIERVFGKYGMVVYVSI 158
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP6_MOUSE (La-related protein 6 OS=Mus musculus GN=Larp6 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 48/176 (27.27%), Postives = 90/176 (51.14%), Query Frame = -2 Query: 63 EDPIKDHENSSTPAVLTD-------------DLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 500 E+P + H +++T D +L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S L ++ + +KVRR P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 60 EEPSRGHSSATTSGGENDREDLEPEWRPPDEELIRKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVTLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLHLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LARP6_HUMAN (La-related protein 6 OS=Homo sapiens GN=LARP6 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.547e-14 Identity = 43/146 (29.45%), Postives = 82/146 (56.16%), Query Frame = -2 Query: 63 DDLKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRESSLLVVSSNGKKVRRLNPLPVTEVRD--------------PKLFTVLV---ENLPEDHSVENMQRIFAEAGKIKSICIRDP 449 ++L ++++ Q+E+YFSDENL D +++ +R+NK G+V + ++ SF+K+K LTR+ AL+ S +L ++ + +KVRR P+P+ + PKL+ + ++ +E++ ++F G I S+ I P Sbjct: 90 EELIKKLVDQIEFYFSDENLEKDAFLLKHVRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELNEDHRKVRRTTPVPLFPNENLPSKMLLVYDLYLSPKLWALATPQKNGRVQEKVMEHLLKLFGTFGVISSVRILKP 235
BLAST of GE213465 vs. ExPASy Swiss-Prot
Match: LA_RAT (Lupus La protein homolog OS=Rattus norvegicus GN=Ssb PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.736e-13 Identity = 47/132 (35.61%), Postives = 77/132 (58.33%), Query Frame = -2 Query: 69 LKQRIIKQVEYYFSDENLPTDKYMMNLIRKNKEGFVPISVIASFRKLKRLTRNHAWIVAALRES--SLLVVSSNGKKVRRLNPLPVTEV-----RDPKLFTVLVENLPEDHSVENMQRIFAEAGKIKSICIR 443 L+ +I Q+EYYF D NLP DK++ I K EG+VP+ + F +L RLT + IV AL +S +L+ VS++ K+RR P+ EV D K +V ++ P D ++++++ + G+I +I +R Sbjct: 13 LEAKICHQIEYYFGDFNLPRDKFLKEQI-KLDEGWVPLETMIKFNRLNRLTTDFNVIVQALSKSKANLMEVSADKTKIRRSPSRPLPEVTDEYKNDVKNRSVYIKGFPTDATLDDIKEWLDDKGQILNIQMR 143 The following BLAST results are available for this feature:
BLAST of GE213465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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