GE213450

Overview
NameGE213450
Unique NameGE213450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13774 contig Csv1_Contig13774:1142..1757. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE_SOYBN (Vacuolar-processing enzyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45
Identity = 85/129 (65.89%), Postives = 103/129 (79.84%), Query Frame = -1
Query:  208 YKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 594
            Y+ +   SE K+++LKQI ET++HRKH+D S+++IGV+L+GP KGS +L SVRA G  LVDDW CLKSMVRVFETHCG+LTQYGMKHMRAFANICNSGVS+A MEE   AAC G     +H + RGYSA
Sbjct:  367 YQRSNHQSENKTDILKQIAETVKHRKHIDGSVELIGVLLYGPGKGSSVLQSVRAPGSSLVDDWTCLKSMVRVFETHCGTLTQYGMKHMRAFANICNSGVSEASMEEACLAACEGYNAGLFHPSNRGYSA 495          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE_RICCO (Vacuolar-processing enzyme OS=Ricinus communis PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44
Identity = 85/129 (65.89%), Postives = 99/129 (76.74%), Query Frame = -1
Query:  208 YKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 594
            YK +  GSEKK E+L+QI + ++HR HLD+S+ +IG +LFGP K S IL SVR  G PLVDDW CLKSMVRVFET CGSLTQYGMKHMR FANICN+GVS   MEE   AACSG++  QWH   +GYSA
Sbjct:  369 YKRSENGSEKKKEILQQIKDAIKHRSHLDSSMQLIGDLLFGPKKASAILKSVREPGSPLVDDWGCLKSMVRVFETCCGSLTQYGMKHMRTFANICNAGVSHTSMEEACNAACSGHDAGQWHPTNQGYSA 497          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: LEGU_CANEN (Legumain OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 4.510e-44
Identity = 83/129 (64.34%), Postives = 103/129 (79.84%), Query Frame = -1
Query:  208 YKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 594
            Y+ +    EKK+ +L+QITET++HR HLD S+++IGV+L+GP K S +L+SVRA GLPLVDDW CLKSMVRVFETHCGSLTQYGMKHMRAF N+CNSGVS+A MEE  +AAC G +    + +  GYSA
Sbjct:  347 YQRSNHQPEKKTHILEQITETVKHRNHLDGSVELIGVLLYGPGKSSSVLHSVRAPGLPLVDDWTCLKSMVRVFETHCGSLTQYGMKHMRAFGNVCNSGVSKASMEEACKAACGGYDAGLLYPSNTGYSA 475          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPEB_ARATH (Vacuolar-processing enzyme beta-isozyme OS=Arabidopsis thaliana GN=At1g62710 PE=2 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 3.818e-43
Identity = 85/131 (64.89%), Postives = 102/131 (77.86%), Query Frame = -1
Query:  208 YKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQW--HLAIRGYSA 594
            Y+ + +GS KK + LK++TET RHRKHLDAS+++I  ILFGP     +LN VR  GLPLVDDW+CLKSMVRVFE HCGSLTQYGMKHMRAFAN+CN+GVS+ LMEE S AAC G    ++  H +I GYSA
Sbjct:  358 YRTSEDGSRKKDDTLKELTETTRHRKHLDASVELIATILFGPTMN--VLNLVREPGLPLVDDWECLKSMVRVFEEHCGSLTQYGMKHMRAFANVCNNGVSKELMEEASTAACGGYSEARYTVHPSILGYSA 486          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE2_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.818e-43
Identity = 82/129 (63.57%), Postives = 100/129 (77.52%), Query Frame = -1
Query:  208 YKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 594
            Y+ +    EKK+++LKQI E ++HRKHLD S+++IGV+L+GP+K S +L SVR  GLPLVDDW CLKSMVRV+ETHCGSLTQYGMKHMRAFANICNSGVS+  ME+   AAC G      H +  GYSA
Sbjct:  365 YQRSNHLPEKKTDILKQIEEIVKHRKHLDGSVELIGVLLYGPEKASSVLRSVRTTGLPLVDDWTCLKSMVRVYETHCGSLTQYGMKHMRAFANICNSGVSETSMEKACVAACGGYHAGLLHPSNTGYSA 493          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPEG_ARATH (Vacuolar-processing enzyme gamma-isozyme OS=Arabidopsis thaliana GN=At4g32940 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.190e-36
Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = -1
Query:  208 RYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 597
            +Y+ A EGS +K+E  KQ+ E M HR H+D S+ ++G ILFG  +G  +LN VR+ G PLVDDW CLK+ VR FE HCGSL+QYG+KHMR+FANICN+G+    MEE +  AC+      W    RG+SA
Sbjct:  365 KYRKAPEGSARKTEAQKQVLEAMSHRLHIDNSVILVGKILFGISRGPEVLNKVRSAGQPLVDDWNCLKNQVRAFERHCGSLSQYGIKHMRSFANICNAGIQMEQMEEAASQACTTLPTGPWSSLNRGFSA 494          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE_VICSA (Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.029e-36
Identity = 69/130 (53.08%), Postives = 92/130 (70.77%), Query Frame = -1
Query:  208 RYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 597
            +++ A EGS +K+E  KQ+ E M HRKH+D S+ +IG +LFG +KG+ +L+ VR  G PLVD+W CLK+MV+ FETHCGSL+QYGMKHMR+FANICN+G+    M E S  AC+      W     G+SA
Sbjct:  364 KFRKAPEGSSQKNEAEKQVLEAMSHRKHIDNSVKLIGQLLFGIEKGTELLDVVRPAGSPLVDNWDCLKTMVKTFETHCGSLSQYGMKHMRSFANICNAGIPNEPMAEASAQACASIPANPWSSLQGGFSA 493          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE1_PHAVU (Vacuolar-processing enzyme OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.029e-36
Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = -1
Query:  208 RYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 597
            +++ A EGS KK+E  KQ+ E M HR H+D S++++G +LFG +K   +LN+VR  G  LVDDW CLK+MVR FETHCGSL+QYGMKHMR+FAN+CN G+ +  M E S  AC       W    RG+SA
Sbjct:  355 KFRKAPEGSPKKNEARKQVLEVMSHRMHIDDSVELVGKLLFGIEKAPELLNAVRPAGSALVDDWDCLKTMVRTFETHCGSLSQYGMKHMRSFANMCNVGIKKEQMREASAQACVTIPANPWSSLQRGFSA 484          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPE_CITSI (Vacuolar-processing enzyme OS=Citrus sinensis PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 5.904e-36
Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = -1
Query:  208 RYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 597
            +Y+ A EG+ +K+E  KQ  E M HR H+D SI +IG +LFG +KG  ILN+VR  G PLVDDW CLKS+VR FE+HCG+L+QYGMKHMR+ ANICN+G+ +  M E S  AC       W    +G+SA
Sbjct:  365 KYRKAPEGTPRKAEAQKQFFEAMSHRMHVDHSIKLIGKLLFGIEKGPEILNTVRPAGQPLVDDWGCLKSLVRTFESHCGALSQYGMKHMRSLANICNTGIGKEKMAEASAQACENIPSGPWSSLDKGFSA 494          
BLAST of GE213450 vs. ExPASy Swiss-Prot
Match: VPEA_ARATH (Vacuolar-processing enzyme alpha-isozyme OS=Arabidopsis thaliana GN=At2g25940 PE=2 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 7.217e-34
Identity = 69/130 (53.08%), Postives = 88/130 (67.69%), Query Frame = -1
Query:  208 RYKNAAEGSEKKSEMLKQITETMRHRKHLDASIDMIGVILFGPDKGSRILNSVRARGLPLVDDWQCLKSMVRVFETHCGSLTQYGMKHMRAFANICNSGVSQALMEETSEAACSGNELRQWHLAIRGYSA 597
            +Y+ A EGS +K E  KQ+ E M HR H+D SI +IG++LFG + G  +LN VR  G PLVDDW CLKS+VR FE HCGSL+QYG+KHMR+ AN+CN+G+    MEE +  AC       W    RG+SA
Sbjct:  350 KYQKAPEGSARKVEAQKQVLEAMSHRLHVDNSILLIGILLFGLE-GHAVLNKVRPSGEPLVDDWDCLKSLVRAFERHCGSLSQYGIKHMRSIANMCNAGIQMRQMEEAAMQACPTIPTSPWSSLDRGFSA 478          
The following BLAST results are available for this feature:
BLAST of GE213450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
VPE_SOYBN6.958e-4565.89Vacuolar-processing enzyme OS=Glycine max PE=2 SV=... [more]
VPE_RICCO1.550e-4465.89Vacuolar-processing enzyme OS=Ricinus communis PE=... [more]
LEGU_CANEN4.510e-4464.34Legumain OS=Canavalia ensiformis PE=1 SV=1[more]
VPEB_ARATH3.818e-4364.89Vacuolar-processing enzyme beta-isozyme OS=Arabido... [more]
VPE2_PHAVU3.818e-4363.57Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPEG_ARATH1.190e-3653.08Vacuolar-processing enzyme gamma-isozyme OS=Arabid... [more]
VPE_VICSA2.029e-3653.08Vacuolar-processing enzyme OS=Vicia sativa PE=1 SV... [more]
VPE1_PHAVU2.029e-3653.08Vacuolar-processing enzyme OS=Phaseolus vulgaris P... [more]
VPE_CITSI5.904e-3653.85Vacuolar-processing enzyme OS=Citrus sinensis PE=2... [more]
VPEA_ARATH7.217e-3453.08Vacuolar-processing enzyme alpha-isozyme OS=Arabid... [more]
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Properties
Property NameValue
Genbank description330 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.