GE213449

Overview
NameGE213449
Unique NameGE213449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:451..1112. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = -1
Query:  410 SESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 631
            SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:   96 SEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.247e-30
Identity = 60/76 (78.95%), Postives = 65/76 (85.53%), Query Frame = -1
Query:  410 SESVEAKPK--EGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 631
            SE V   PK  EGP+RCS+C+KRVGLTGF CRCGNLYC  HRYSDKH+C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:   96 SEGVTVNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP4_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Oryza sativa subsp. japonica GN=SAP4 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.595e-29
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = -1
Query:  410 SVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 625
            +V  K KEGP+RC++C+KRVGLTGF CRCGN+YC  HRYSDKH C FDYRTAARDAI KANPV+KAEKLDKI
Sbjct:  102 AVVPKVKEGPNRCATCRKRVGLTGFNCRCGNMYCALHRYSDKHECQFDYRTAARDAIAKANPVVKAEKLDKI 173          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP2_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 2 OS=Arabidopsis thaliana GN=SAP2 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.197e-24
Identity = 50/69 (72.46%), Postives = 61/69 (88.41%), Query Frame = -1
Query:  410 AKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 616
            AKPK GPSRC++C KRVGLTGFKCRCG+L+C +HRY+D H+C F+Y  AA++AI KANPV+KAEKLDKI
Sbjct:  106 AKPK-GPSRCTTCNKRVGLTGFKCRCGSLFCGTHRYADVHDCSFNYHAAAQEAIAKANPVVKAEKLDKI 173          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 42/80 (52.50%), Postives = 62/80 (77.50%), Query Frame = -1
Query:  410 RPRSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 649
            RPR    ++V+ + ++  +RCS C+K+VGLTGF+CRCG L+C  HRYSD+H+C +DY+TA R+AI + NPV+KA K+ K+
Sbjct:   83 RPRE--IDAVKKRDQQIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.147e-21
Identity = 41/72 (56.94%), Postives = 56/72 (77.78%), Query Frame = -1
Query:  419 LSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 634
            +  S +A      +RC SC++RVGLTGF+CRCG LYC +HRYSD+H+C FDY++AARDAI + NPV++A K+
Sbjct:   96 VESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKI 167          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.048e-20
Identity = 46/82 (56.10%), Postives = 57/82 (69.51%), Query Frame = -1
Query:  410 SRPRSELSESVEAK-PKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 652
            S+P S  SE    + PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ AEK+ +I
Sbjct:  132 SQPSSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = -1
Query:  410 RPRSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 649
            +P  E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  145 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = -1
Query:  410 RPRSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 649
            +P  E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  130 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of GE213449 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.369e-20
Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = -1
Query:  410 RPRSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 649
            +P  E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  145 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
The following BLAST results are available for this feature:
BLAST of GE213449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP8_ORYSJ4.247e-3078.95Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI4.247e-3078.95Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP4_ORYSJ3.595e-2977.78Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP2_ARATH1.197e-2472.46Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP5_ARATH4.706e-2152.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ6.147e-2156.94Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE1.048e-2056.10AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN6_RAT1.369e-2055.00AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_PONAB1.369e-2055.00AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_MOUSE1.369e-2055.00AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank description329 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.