GE213446

Overview
NameGE213446
Unique NameGE213446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9896 contig Csv1_Contig9896:889..1220. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GE213446 vs. ExPASy Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 2.247e-31
Identity = 67/100 (67.00%), Postives = 79/100 (79.00%), Query Frame = -1 
Query:   27 WSRPRYHLDDLPFKLGEMPTNYGGFREKVKGVEIRKTIEALDQLKGLPSRGDVEPGDIPSLLDLGLSQSAAMSQGGKPAANSMKGGETEALQRLKKFAAE 326
            W    YHLDDLPFK+ ++P+NYG F++KV+ +EIRKTI ALDQLK LPSRGDVE GDIPSLLDLG+S +   SQ GKP   +M GGETEAL RLK FAA+
Sbjct:  245 WGSTLYHLDDLPFKIEDLPSNYGAFKDKVQKLEIRKTIAALDQLKSLPSRGDVELGDIPSLLDLGISPTPRTSQEGKP---TMVGGETEALTRLKSFAAD 341
The following BLAST results are available for this feature:
BLAST of GE213446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PHR2_ARATH2.247e-3167.00Blue-light photoreceptor PHR2 OS=Arabidopsis thali... [more]
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Properties
Property NameValue
Genbank description323 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.