GE213442
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP_CITUN (Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu GN=PAP PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.057e-21 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF GLFPLLSRGTLPLARVEEISQTIDSENFTVQNSI+FAGPLATTSIST Sbjct: 155 YTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSIST 206
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF GLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSIST Sbjct: 158 YTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSIST 209
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: LIPC_SOLDE (Light-induced protein, chloroplastic OS=Solanum demissum PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.286e-18 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF GLFPLLSRG LPL RVEEISQTIDSE+FTVQNS+ FAGPLATTSIST Sbjct: 158 YTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSIST 209
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP2_BRACM (Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.337e-18 Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF+GLFPLLSRG +PL +V+EISQTIDS+NFTV+NS+ FAGPLATTSIST Sbjct: 151 YTSFVGLFPLLSRGIVPLVKVDEISQTIDSDNFTVENSVLFAGPLATTSIST 202
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP2_ARATH (Probable plastid-lipid-associated protein 2, chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.138e-17 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF+ LFPLLSRG +PL +V+EISQTIDS+NFTVQNS+RFAGPL T SIST Sbjct: 142 YTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSIST 193
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP1_ARATH (Probable plastid-lipid-associated protein 1, chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.019e-15 Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF+GLFPLLSR PL +V+EISQTIDS++FTVQNS+RFAGP +TTS ST Sbjct: 150 YTSFVGLFPLLSRRIEPLVKVDEISQTIDSDSFTVQNSVRFAGPFSTTSFST 201
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP1_BRACM (Plastid lipid-associated protein 1, chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.331e-15 Identity = 39/52 (75.00%), Postives = 46/52 (88.46%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF+GLFPLLSR PL +V+EISQTIDS++FTV NS+RFA PLATTS+ST Sbjct: 159 YTSFVGLFPLLSRRISPLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLST 210
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: CHRC_CUCSA (Chromoplast-specific carotenoid-associated protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.331e-15 Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YT+F GLFPLLSR LPL +VEEISQTIDSEN TVQNS++F+GPLATTSI+T Sbjct: 155 YTTFAGLFPLLSRN-LPLVKVEEISQTIDSENLTVQNSVQFSGPLATTSITT 205
BLAST of GE213442 vs. ExPASy Swiss-Prot
Match: PAP2_ORYSJ (Probable plastid-lipid-associated protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.873e-15 Identity = 41/53 (77.36%), Postives = 46/53 (86.79%), Query Frame = 2 Query: 23 YTSFLGLFPLLSRGTLP-LARVEEISQTIDSENFTVQNSIRFAGPLATTSIST 178 YTSF LFPLL G+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+ST Sbjct: 151 YTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVST 203 The following BLAST results are available for this feature:
BLAST of GE213442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
|