GE213436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_ARATH (Eukaryotic translation initiation factor 6 OS=Arabidopsis thaliana GN=At2g39820 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.517e-24 Identity = 52/68 (76.47%), Postives = 61/68 (89.71%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDSYV 224 QVPLVAGTVNRGS+VI AGLTVNDWTAFCGSDTTA ELSV+ ++FKL ++QP+ + EMRKSLID+YV Sbjct: 180 QVPLVAGTVNRGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_HUMAN (Eukaryotic translation initiation factor 6 OS=Homo sapiens GN=EIF6 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.079e-23 Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDS 218 QVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EAQP+ I MR SLIDS Sbjct: 178 QVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_BOVIN (Eukaryotic translation initiation factor 6 OS=Bos taurus GN=EIF6 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 5.079e-23 Identity = 52/66 (78.79%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDS 218 QVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EAQP+ I MR SLIDS Sbjct: 178 QVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_MOUSE (Eukaryotic translation initiation factor 6 OS=Mus musculus GN=Eif6 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 1.478e-22 Identity = 51/66 (77.27%), Postives = 56/66 (84.85%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDS 218 QVPLVAGTVNRGSEVI AG+ VNDW AFCG DTT+TELSV+ESVFKL EA+P+ I MR SLIDS Sbjct: 178 QVPLVAGTVNRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_SCHPO (Eukaryotic translation initiation factor 6 OS=Schizosaccharomyces pombe GN=tif6 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.806e-20 Identity = 47/67 (70.15%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDSY 221 QVPLVAGT+NRGS+VIGAGL VNDW AF G DTTATEL+V ES+FKL++AQP+AI+ R +L++SY Sbjct: 178 QVPLVAGTINRGSDVIGAGLVVNDWCAFAGLDTTATELAVCESIFKLQDAQPSAIISN-RDTLVESY 243
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_DROME (Probable eukaryotic translation initiation factor 6 OS=Drosophila melanogaster GN=eIF6 PE=2 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 9.912e-19 Identity = 43/65 (66.15%), Postives = 54/65 (83.08%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLID 215 QVPLVAGTVNRGSEV+ AG+ VNDW +F G +TTATE+SVIESVFKL +AQP + ++R +LI+ Sbjct: 178 QVPLVAGTVNRGSEVLAAGMVVNDWLSFVGMNTTATEISVIESVFKLNQAQPATVTTKLRAALIE 242
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_YEAST (Eukaryotic translation initiation factor 6 OS=Saccharomyces cerevisiae GN=TIF6 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.766e-18 Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDSY 221 QVPLVAGTVNRGS V+GAG+ VND+ A G DTTA ELSVIES+F+L++AQP +I +R +LI++Y Sbjct: 178 QVPLVAGTVNRGSSVVGAGMVVNDYLAVTGLDTTAPELSVIESIFRLQDAQPESISGNLRDTLIETY 244
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_CAEEL (Eukaryotic translation initiation factor 6 OS=Caenorhabditis elegans GN=eif-6 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.766e-18 Identity = 42/67 (62.69%), Postives = 56/67 (83.58%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLRE-AQPNAIVDEMRKSLIDS 218 Q+P+VAGT NRGSE+IGAG+ VNDW AFCG D+T+TELSV+ES+FKL E P +I +++R +LI+S Sbjct: 178 QIPVVAGTCNRGSELIGAGMVVNDWVAFCGLDSTSTELSVVESIFKLGEQGAPTSISNQLRDTLIES 244
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_DICDI (Probable eukaryotic translation initiation factor 6 OS=Dictyostelium discoideum GN=eif6 PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.919e-18 Identity = 40/66 (60.61%), Postives = 55/66 (83.33%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNAIVDEMRKSLIDS 218 QVPLVAGTVNRG+E + AG VNDWTA G+DTTATE+SVIES+F L+ ++P+ I++ +R S++D+ Sbjct: 178 QVPLVAGTVNRGNECVAAGCVVNDWTAIVGADTTATEISVIESIFALQGSKPSNIINNIRNSIVDN 243
BLAST of GE213436 vs. ExPASy Swiss-Prot
Match: IF6_TRYCR (Eukaryotic translation initiation factor 6 (Fragment) OS=Trypanosoma cruzi PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.934e-14 Identity = 35/68 (51.47%), Postives = 51/68 (75.00%), Query Frame = 3 Query: 21 QVPLVAGTVNRGSEVIGAGLTVNDWTAFCGSDTTATELSVIESVFKLREAQPNA---IVDEMRKSLID 215 QVP+VAGT+NRG+ IG+GL VNDW AFCG +TTATE++V+E +F+LR ++ ++R +L+D Sbjct: 44 QVPVVAGTINRGNAAIGSGLVVNDWAAFCGLNTTATEITVVERIFQLRRDLGGGRANLLQQLRDTLVD 111 The following BLAST results are available for this feature:
BLAST of GE213436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
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