GE213433

Overview
NameGE213433
Unique NameGE213433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5740 contig Csv1_Contig5740:268..651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GE213433 vs. ExPASy Swiss-Prot
Match: PPA27_ARATH (Probable inactive purple acid phosphatase 27 OS=Arabidopsis thaliana GN=PAP27 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 1.357e-44
Identity = 81/116 (69.83%), Postives = 92/116 (79.31%), Query Frame = -1
Query:   22 GQVSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYXXXXXXXXXXXXXXXGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEY 369
            G  ++ WYGQEGSFEEPMGRESLQ+LWQKYKVDIAF+GHVHNYERTCPIYQNQC++ EK HY               GSHLS FS + P WS++RDYD+GFVKLTAF+HSSLLFEY
Sbjct:  460 GYSTNDWYGQEGSFEEPMGRESLQKLWQKYKVDIAFYGHVHNYERTCPIYQNQCMDNEKSHYSGAFKGTIHVVVGGAGSHLSSFSSLKPKWSIFRDYDYGFVKLTAFDHSSLLFEY 575          
BLAST of GE213433 vs. ExPASy Swiss-Prot
Match: PPA24_ARATH (Probable inactive purple acid phosphatase 24 OS=Arabidopsis thaliana GN=PAP24 PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 8.234e-42
Identity = 77/116 (66.38%), Postives = 90/116 (77.59%), Query Frame = -1
Query:   22 GQVSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYXXXXXXXXXXXXXXXGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEY 369
            G  ++ WYG+EG+FEEPMGRESLQ+LWQKYKVD+AF+GHVHNYERTCPIY++QCVN +K HY               GSHLS FS + P WSL RDYD+GFVKLTA +HSSLLFEY
Sbjct:  464 GYSTNDWYGKEGTFEEPMGRESLQKLWQKYKVDLAFYGHVHNYERTCPIYESQCVNNDKDHYSGTFKGTIHVVVGGAGSHLSPFSSLVPKWSLVRDYDFGFVKLTASDHSSLLFEY 579          
BLAST of GE213433 vs. ExPASy Swiss-Prot
Match: NPP_HORVU (Nucleotide pyrophosphatase/phosphodiesterase (Fragments) OS=Hordeum vulgare GN=npp PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 1.553e-40
Identity = 72/117 (61.54%), Postives = 88/117 (75.21%), Query Frame = -1
Query:   19 GQVSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYXXXXXXXXXXXXXXXGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEYL 369
            G  S+ WY  +GSFEEP GRESLQ+LWQ+Y+VDIA+FGHVHNYERTCP+YQ+QCVN +K HY               GSHLS ++   P WS++RD+D+GF KLTAFNHSSLLFEY+
Sbjct:  217 GYSSNSWYADQGSFEEPEGRESLQKLWQRYRVDIAYFGHVHNYERTCPLYQSQCVNADKTHYSGTMNGTIFVVAGGGGSHLSSYTTAIPKWSIFRDHDYGFTKLTAFNHSSLLFEYM 333          
BLAST of GE213433 vs. ExPASy Swiss-Prot
Match: PPA1_ARATH (Probable inactive purple acid phosphatase 1 OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 2.741e-37
Identity = 69/116 (59.48%), Postives = 87/116 (75.00%), Query Frame = -1
Query:   22 GQVSDYWYGQEGSFEEPMGRESLQRLWQKYKVDIAFFGHVHNYERTCPIYQNQCVNTEKYHYXXXXXXXXXXXXXXXGSHLSDFSEVTPNWSLYRDYDWGFVKLTAFNHSSLLFEY 369
            G  S Y+Y +EGSF EPMGRESLQ+LWQKYKVDIA +GH HNYERTCP+YQ+ C + EK +Y               G+ L++FS++ PNWSL+RDYD+GF+KLTA +HS+LLFEY
Sbjct:  462 GYSSTYFYAEEGSFAEPMGRESLQKLWQKYKVDIAIYGHAHNYERTCPVYQSVCTSHEKSNYKAPLNGTIHIVAGGGGAGLAEFSDLQPNWSLFRDYDYGFLKLTAIDHSNLLFEY 577          
The following BLAST results are available for this feature:
BLAST of GE213433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
PPA27_ARATH1.357e-4469.83Probable inactive purple acid phosphatase 27 OS=Ar... [more]
PPA24_ARATH8.234e-4266.38Probable inactive purple acid phosphatase 24 OS=Ar... [more]
NPP_HORVU1.553e-4061.54Nucleotide pyrophosphatase/phosphodiesterase (Frag... [more]
PPA1_ARATH2.741e-3759.48Probable inactive purple acid phosphatase 1 OS=Ara... [more]
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Properties
Property NameValue
Genbank description308 BH (somaclonal variated plants of Skaggs Bonanza navel orange) SSH library Citrus sinensis cDNA 5, mRNA sequence.